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Protein Overview: ATB15_ARATH

General Information:
Name(s) found: ATB15_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|75216693|sp|Q9ZU11.1|ATB15_ARATH RecName: Full=Homeobox-leucine zipper protein ATHB-15; AltName: Full=Homeodomain transcription factor ATHB-15; AltName: Full=HD-ZIP protein ATHB-15; AltName: Full=Protein CORONA; AltName: Full=Protein INCURVATA 4 [NCBI NR]
  • gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from Arabidopsis thaliana containing Homeobox PF|00046 and bZIP PF|00170 domains [NCBI NR]
  • pir||E96561 hypothetical protein F5F19.21 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|19578319|emb|CAD28400.1| homeodomain-leucine zipper protein [Arabidopsis thaliana] [NCBI NR]
  • gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana] [NCBI NR]
  • gi|15218158|ref|NP_175627.1| ATHB-15; DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • Homeobox-leucine zipper protein ATHB-15 OS=Arabidopsis thaliana GN=ATHB-15 PE=1 SV=1 [Swiss-Prot]
  • (Q9ZU11) F5F19.21 protein (At1g52150/F5F19_21) (Homeodomain-leucine zipper protein) [athaliana3702.FASTAC.txt]
  • homeodomain-leucine zipper protein [Arabidopsis thaliana]gi|16974581|gb|AAL31186.1| At1g52150/F5F19_21 [Arabidopsis thaliana]gi|4220462|gb|AAD12689.1| Strong similarity to gb|Z50851 HD-zip (athb-8) gene from Arabidopsis thaliana containing Homeobox PF|0 [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Homeobox-leucine zipper family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: ATHB15, CNA, ICU4, ATHB-15 | ATHB-15 (INCURVATA 4); DNA binding / transcription factor | chr1:19413582-19417630 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • homeodomain-leucine zipper protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • ATHB-15 (INCURVATA 4); DNA binding / transcription factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At1g52150/F5F19_21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Strong similarity to gb|Z50851 HD-zip (athb-8) gene from Arabidopsis thaliana containing Homeobox PF|00046 and bZIP PF|00170 domains [nr-271106-contam.fasta]
  • | Symbols: ATHB-15, ATHB15, CNA, ICU4 | Homeobox-leucine zipper family protein / lipid-binding START domain-containing protein | chr1:19409913-19413961 REVERSE LENGTH=836 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 836 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA][ISS]
    Biological Process: regulation of meristem growth [IMP]
    integument development [IGI]
    determination of dorsal identity [IMP]
    phloem or xylem histogenesis [IMP]
    meristem maintenance [TAS]
    regulation of transcription, DNA-dependent [ISS]
    leaf morphogenesis [IMP]
    determination of bilateral symmetry [IMP]
    meristem initiation [IMP]
    organ morphogenesis [IMP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS][TAS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMSCKDGKL GCLDNGKYVR YTPEQVEALE RLYHDCPKPS SIRRQQLIRE CPILSNIEPK  60
   61 QIKVWFQNRR CREKQRKEAS RLQAVNRKLT AMNKLLMEEN DRLQKQVSQL VHENSYFRQH 120
  121 TPNPSLPAKD TSCESVVTSG QHQLASQNPQ RDASPAGLLS IAEETLAEFL SKATGTAVEW 180
  181 VQMPGMKPGP DSIGIIAISH GCTGVAARAC GLVGLEPTRV AEIVKDRPSW FRECRAVEVM 240
  241 NVLPTANGGT VELLYMQLYA PTTLAPPRDF WLLRYTSVLE DGSLVVCERS LKSTQNGPSM 300
  301 PLVQNFVRAE MLSSGYLIRP CDGGGSIIHI VDHMDLEACS VPEVLRPLYE SPKVLAQKTT 360
  361 MAALRQLKQI AQEVTQTNSS VNGWGRRPAA LRALSQRLSR GFNEAVNGFT DEGWSVIGDS 420
  421 MDDVTITVNS SPDKLMGLNL TFANGFAPVS NVVLCAKASM LLQNVPPAIL LRFLREHRSE 480
  481 WADNNIDAYL AAAVKVGPCS ARVGGFGGQV ILPLAHTIEH EEFMEVIKLE GLGHSPEDAI 540
  541 VPRDIFLLQL CSGMDENAVG TCAELIFAPI DASFADDAPL LPSGFRIIPL DSAKEVSSPN 600
  601 RTLDLASALE IGSAGTKAST DQSGNSTCAR SVMTIAFEFG IESHMQEHVA SMARQYVRGI 660
  661 ISSVQRVALA LSPSHISSQV GLRTPLGTPE AQTLARWICQ SYRGYMGVEL LKSNSDGNES 720
  721 ILKNLWHHTD AIICCSMKAL PVFTFANQAG LDMLETTLVA LQDISLEKIF DDNGRKTLCS 780
  781 EFPQIMQQGF ACLQGGICLS SMGRPVSYER AVAWKVLNEE ENAHCICFVF INWSFV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..153] PSI-BLAST 15.522879 Solution structure of the homeobox domain of the human paired box protein Pax-6
    2 View Details [154..379] PSI-BLAST 29.221849 No description for 2psoA was found.
    3 View Details [380..551] MSA 1.06698 View MSA. No confident structure predictions are available.
    4 View Details [552..679] deduced N/A No confident structure predictions are available.
    5 View Details [680..836] Pfam 93.69897 No description for PF08670.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle