YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|9758274, gi|3...

General Information:
Name(s) found: gi|9758274 [NCBI NR]
gi|30696543 [NCBI NR]
gi|22137324 [NCBI NR]
gi|21592741 [NCBI NR]
gi|18423691 [NCBI NR]
gi|14326564 [NCBI NR]
Description(s) found:
SHOW ONLY BEST
  • gi|9758274|dbj|BAB08773.1| translation initiation factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30696543|ref|NP_851192.1| eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|22137324|gb|AAM91507.1| AT5g54940/MBG8_21 [Arabidopsis thaliana] [NCBI NR]
  • gi|21592741|gb|AAM64690.1| translation initiation factor-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18423691|ref|NP_568818.1| eukaryotic translation initiation factor SUI1, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|14326564|gb|AAK60326.1|AF385736_1 AT5g54940/MBG8_21 [Arabidopsis thaliana] [NCBI NR]
  • (Q9FFT6) Translation initiation factor-like protein (AT5g54940/MBG8_21) [athaliana3702.FASTAC.txt]
  • translation initiation factor-like protein [Arabidopsis thaliana]gi|9758274|dbj|BAB08773.1| translation initiation factor-like protein [Arabidopsis thaliana]gi|22137324|gb|AAM91507.1| AT5g54940/MBG8_21 [Arabidopsis thaliana]gi|14326564|gb|AAK60326.1| A [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Eukaryotic translation initiation factor SUI1 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | eukaryotic translation initiation factor SUI1, putative | chr5:22325646-22325984 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • translation initiation factor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT5g54940/MBG8_21 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • translation initiation factor-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Translation initiation factor SUI1 family protein | chr5:22308420-22308758 REVERSE LENGTH=112 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • AT5g54940/MBG8_21 OS=Arabidopsis thaliana GN=At5g54940 PE=4 SV=1 [ARATH-contam.fasta]
  • AT5g54940/MBG8_21 OS=Arabidopsis thaliana GN=At5g54940 PE=2 SV=1 [ARATH.fasta.20160308]
    • Organism: Arabidopsis thaliana
    Length: 112 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: translational initiation [IEA][ISS]
    translation [IEA]
    Molecular Function: translation initiation factor activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVELDIQIPS AYDPFAEAKD SDAPGAKENI HIRIQQRNGK KSLTTVQGLK KEYSYERILK  60
   61 DLKKDFCCNG NVVQDKELGK IIQLQGDQRK KVSQFLVQTG IAKKDQIKIH GF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 39.522879 HUMAN TRANSLATION INITIATION FACTOR EIF1, NMR, 29 STRUCTURES

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • translation initiation factor activity
    		•  6.56930940751046 bayes_pls_golite062009
  • nucleic acid binding
    		•  2.96971687610169 bayes_pls_golite062009
  • binding
    		•  2.42849959483419 bayes_pls_golite062009
  • translation regulator activity
    		•  2.27579767245564 bayes_pls_golite062009
  • translation factor activity, nucleic acid binding
    		•  2.25914933413253 bayes_pls_golite062009
  • protein binding
    		•  0.420735403363425 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle