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Protein Overview: gi|110742199, gi...

General Information:
Name(s) found: gi|88193802 [NCBI NR]
gi|5306268 [NCBI NR]
gi|25370728 [NCBI NR]
gi|18401383 [NCBI NR]
gi|110742199 [NCBI NR]
Description(s) found:
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  • gi|88193802|gb|ABD42990.1| At2g27290 [Arabidopsis thaliana] [NCBI NR]
  • gi|5306268|gb|AAD42000.1| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B84671 hypothetical protein At2g27290 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|18401383|ref|NP_565645.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|110742199|dbj|BAE99026.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • (Q9XIN6) At2g27290 protein [athaliana3702.FASTAC.txt]
  • expressed protein [Arabidopsis thaliana]gi|25370728|pir||B84671 hypothetical protein At2g27290 [imported] - Arabidopsis thalianagi|18401383|ref|NP_565645.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | similar to unnamed protein product [Vitis vinifera] (GB:CAO48682.1); contains InterPro domain Protein of unknown function DUF1279 (InterPro:IPR009688) | chr2:11685664-11686843 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • expressed protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • hypothetical protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • At2g27290 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Protein of unknown function (DUF1279) | chr2:11678586-11679765 REVERSE LENGTH=201 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • At2g27290 OS=Arabidopsis thaliana GN=At2g27290 PE=2 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 201 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IDA]
    chloroplast thylakoid membrane [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAMMLLQIPP SSSLLNTRNL QIRFFHSSVS ASSKKFRCRA VREKAEDIDK NISPPSSSPP  60
   61 PPSAEEVTKK YGLEVGLWKI LSSKDDEGSD GDNKKKKSKT DEAKELLAKY GGAYLATSIT 120
  121 LSLISFSLCY VLVTSGVDVQ ALLLKVGIST NETGEKVGAF ALAYAAHKAA SPIRFPPTVA 180
  181 LTPIVANWIG KKVDKEKDDD K

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..88] deduced N/A No confident structure predictions are available.
    2 View Details [89..201] Pfam 57.408935 No description for PF06916.4 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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