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Protein Overview: gi|6466942, gi|1...

General Information:
Name(s) found: gi|6466942 [NCBI NR]
gi|21700847 [NCBI NR]
gi|21593161 [NCBI NR]
gi|17978995 [NCBI NR]
gi|15231485 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|6466942|gb|AAF13077.1|AC009176_4 putative small nuclear ribonucleoprotein (Sm-D1) [Arabidopsis thaliana] [NCBI NR]
  • gi|21700847|gb|AAM70547.1| AT3g07590/MLP3_4 [Arabidopsis thaliana] [NCBI NR]
  • gi|21593161|gb|AAM65110.1| putative small nuclear ribonucleoprotein Sm-D1 [Arabidopsis thaliana] [NCBI NR]
  • gi|17978995|gb|AAL47458.1| AT3g07590/MLP3_4 [Arabidopsis thaliana] [NCBI NR]
  • gi|15231485|ref|NP_187416.1| small nuclear ribonucleoprotein D1, putative / snRNP core protein D1, putative / Sm protein D1, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 114 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    plasma membrane [IDA]
    small nucleolar ribonucleoprotein complex [ISS]
    Biological Process: NONE FOUND
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKLVRFLMKL NNETVSIELK NGTVVHGTIT GVDVSMNTHL KTVKMSLKGK NPVTLDHLSL  60
   61 RGNNIRYYIL PDSLNLETLL VEDTPRVKPK KPVAGKAVGR GRGRGRGRGR GRGR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..114] PSI-BLAST 24.522879 D1 core SNRNP protein


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle