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Protein Overview: AHL21_ARATH

General Information:
Name(s) found: AHL21_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • AT-hook motif nuclear-localized protein 21 OS=Arabidopsis thaliana GN=AHL21 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 285 amino acids

    Gene Ontology:
    Cellular Component: nucleoplasm [IDA]
    Biological Process: carpel development [IMP]
    anther development [IMP]
    negative regulation of transcription [IEP]
    Molecular Function: DNA binding [IDA]
    AT DNA binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGLDLGTTS RYVHNVDGGG GGQFTTDNHH EDDGGAGGNH HHHHHNHNHH QGLDLIASND  60
   61 NSGLGGGGGG GSGDLVMRRP RGRPAGSKNK PKPPVIVTRE SANTLRAHIL EVGSGCDVFE 120
  121 CISTYARRRQ RGICVLSGTG TVTNVSIRQP TAAGAVVTLR GTFEILSLSG SFLPPPAPPG 180
  181 ATSLTIFLAG AQGQVVGGNV VGELMAAGPV MVMAASFTNV AYERLPLDEH EEHLQSGGGG 240
  241 GGGNMYSEAT GGGGGLPFFN LPMSMPQIGV ESWQGNHAGA GRAPF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..93] MSA 2.084989 View MSA. No confident structure predictions are available.
    2 View Details [94..285] PSI-BLAST 30.522879 No description for 2nmuA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • catalytic activity
    		•  0.210430303475354 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.57

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle