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Protein Overview: HRD3A_ARATH

General Information:
Name(s) found: HRD3A_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • ERAD-associated E3 ubiquitin-protein ligase component HRD3A OS=Arabidopsis thaliana GN=HRD3A PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 678 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    endoplasmic reticulum [IDA]
    Biological Process: biological_process [ND]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRILSYGIVI LSLLVFSFIE FGVHARPVVL VLSNDDLNSG GDDNGVGESS DFDEFGESEP  60
   61 KSEEELDPGS WRSIFEPDDS TVQAASPQYY SGLKKILSAA SEGNFRLMEE AVDEIEAASS 120
  121 AGDPHAQSIM GFVYGIGMMR EKSKSKSFLH HNFAAAGGNM QSKMALAFTY LRQDMHDKAV 180
  181 QLYAELAETA VNSFLISKDS PVVEPTRIHS GTEENKGALR KSRGEEDEDF QILEYQAQKG 240
  241 NANAMYKIGL FYYFGLRGLR RDHTKALHWF LKAVDKGEPR SMELLGEIYA RGAGVERNYT 300
  301 KALEWLTLAA KEGLYSAFNG IGYLYVKGYG VDKKNYTKAR EYFEKAVDNE DPSGHYNLGV 360
  361 LYLKGIGVNR DVRQATKYFF VAANAGQPKA FYQLAKMFHT GVGLKKNLEM ATSFYKLVAE 420
  421 RGPWSSLSRW ALEAYLKGDV GKALILYSRM AEMGYEVAQS NAAWILDKYG ERSMCMGVSG 480
  481 FCTDKERHER AHSLWWRASE QGNEHAALLI GDAYYYGRGT ERDFVRAAEA YMHAKSQSNA 540
  541 QAMFNLGYMH EHGQGLPFDL HLAKRYYDES LQSDAAARLP VTLALASLWL RRNYADTVLV 600
  601 RVVDSLPEVY PKVETWIENV VFEEGNATIL TLFVCLITIL YLRERQRRQV VVVADPVAAD 660
  661 VAQPLDADVA QHLAAFPR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..66] deduced N/A No confident structure predictions are available.
    2 View Details [67..519] PSI-BLAST 28.30103 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    3 View Details [520..605] PSI-BLAST 38.69897 Helicobacter cysteine rich protein C (HcpC)
    4 View Details [606..678] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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