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Protein Overview: RK10_ARATH

General Information:
Name(s) found: RK10_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9955543|emb|CAC05428.1| ribosomal protein L10-like [Arabidopsis thaliana] [NCBI NR]
  • gi|75263201|sp|Q9FY50.1|RK10_ARATH RecName: Full=50S ribosomal protein L10, chloroplastic; AltName: Full=CL10; Flags: Precursor [NCBI NR]
  • gi|21555764|gb|AAM63929.1| ribosomal protein L10-like [Arabidopsis thaliana] [NCBI NR]
  • gi|208879528|gb|ACI31309.1| At5g13510 [Arabidopsis thaliana] [NCBI NR]
  • gi|15240644|ref|NP_196855.1| ribosomal protein L10 family protein [Arabidopsis thaliana] [NCBI NR]
  • 50S ribosomal protein L10, chloroplastic OS=Arabidopsis thaliana GN=RPL10 PE=2 SV=1 [Swiss-Prot]
  • (Q9FY50) Ribosomal protein L10-like [athaliana3702.FASTAC.txt]
  • ribosomal protein L10-like [Arabidopsis thaliana]gi|9955543|emb|CAC05428.1| ribosomal protein L10-like [Arabidopsis thaliana]gi|15240644|ref|NP_196855.1| ribosomal protein L10 family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Ribosomal protein L10 family protein, ribosomal protein L10- Nicotiana tabacum, EMBL:AB010879 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | ribosomal protein L10 family protein | chr5:4341297-4341959 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • 50S ribosomal protein L10, chloroplast precursor (CL10) [nr-271106-contam.fasta]
  • ribosomal protein L10-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • structural constituent of ribosome [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Ribosomal protein L10 family protein | chr5:4341294-4341956 FORWARD LENGTH=220 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 220 amino acids

    Gene Ontology:
    Cellular Component: chloroplast stroma [IDA]
    chloroplast [IDA]
    cytosolic ribosome [IDA]
    ribosome [ISS]
    Biological Process: ribosome biogenesis [IEA]
    translation [ISS]
    Molecular Function: structural constituent of ribosome [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEVALLSFSS SLSPLCHQRI STLTPKTSNS PNYPRLPVIR SAVSRNKKEE TVEAVKSHLE  60
   61 NCHLLAAINY KGLTVKQFQD LRRTLPDTTK LIVAKNTLVF KAIEGTKWEA LKPCMKGMNA 120
  121 WLFVQTDEIP SAIKPYRSFQ KERKLENNDF AGAVFEGKFY APDNFKVLET MPTRAEVYAK 180
  181 MLGALQSPAI NLVTTLQAPA REVIMVLMAY IKKLEDESNA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..220] PSI-BLAST 41.69897 Ribosomal Protein L10-L12(NTD) Complex, Space Group P21

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • structural constituent of ribosome
    		•  3.24907053933923 bayes_pls_golite062009
  • structural molecule activity
    		•  2.96620336163367 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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