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Protein Overview: FIMB2_ARATH

General Information:
Name(s) found: FIMB2_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Fimbrin-2 OS=Arabidopsis thaliana GN=FIM2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 654 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: biological_process [ND]
    Molecular Function: actin binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSGFVGILVS DPWLQNQFTQ VELRSLKSHF TSMKRESGKL TVSDLASRMG KSKVVGDQNL  60
   61 SNEERATLIQ NFHPNLNDEV DFEFYLRIYL NLQAHVNAII GSGVKNSSAF LKAATTTLLH 120
  121 TISDSEKSSY VAHINNYLSG DEFLNKCLPI NPSSNDLFEV AKDGVLLCKL INVAVPGTID 180
  181 ERAINTKSML NPWERNENHT LCLNSAKAIG CTVVNIGTQD IIEGRRHLVL GVISQIIKIQ 240
  241 LLADLNLKKT PQLVELVGDS KDVEELMSLP PEKILLRWMN FQLRKTEYKK TVTNFSSDVK 300
  301 DAEAYTNLLN VLAPEHKNPS HLAVKSSFER AKLVLEHADK MGCRRYLTAK DIVEGSPNLN 360
  361 LAFVAHIFQH RNGLSTQTKQ ISFLENLADD IQISREEKAF RFWINSFDGS VYINNVFEDL 420
  421 RDGWILLQTL DKVSPGIVNW KVSSKPPIKL PFKKVENCNQ VVKLGKQLKF SLVNIAGNDI 480
  481 VQGNKKLILA YLWQLMRYNI LQLLKNLRLH SNGKEITDAD ILEWANAKVR NNGCKTRMYS 540
  541 FRDKSLSDGV FFLELLSSVQ PRSVNWSLVT NGVTDEEKKM NATYVISIAR KLGCSIFLLP 600
  601 EDIIEVNQKM MLTLTASIMY WTLKQPLHLN KPIGSPDSHN GSLLDDSTSD SSIE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] PSI-BLAST 22.0 Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode
    2 View Details [113..654] PSI-BLAST 114.0 Crystal structure of the actin-crosslinking core of Arabidopsis fimbrin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • actin binding
    		•  7.50245214720686 bayes_pls_golite062009
  • cytoskeletal protein binding
    		•  6.48140000563569 bayes_pls_golite062009
  • actin filament binding
    		•  5.47084878097979 bayes_pls_golite062009
  • tubulin binding
    		•  4.22039137964246 bayes_pls_golite062009
  • microtubule binding
    		•  4.15537672860167 bayes_pls_golite062009
  • binding
    		•  2.8655705697659 bayes_pls_golite062009
  • structural constituent of cytoskeleton
    		•  2.57886434162184 bayes_pls_golite062009
  • protein binding
    		•  2.36488136094907 bayes_pls_golite062009
  • microtubule plus-end binding
    		•  2.0465241878708 bayes_pls_golite062009
  • structural constituent of muscle
    		•  1.32485442580942 bayes_pls_golite062009
  • structural molecule activity
    		•  1.00964022808548 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle