| Protein: | FIMB2_ARATH |
| Organism: | Arabidopsis thaliana |
| Length: | 654 amino acids |
| Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for FIMB2_ARATH.
| Description | E-value | Query Range |
Subject Range |
|
|
487.0 | [0..1] | [654..1] |
|
Region A: Residues: [1-112] |
1 11 21 31 41 51
| | | | | |
1 MSGFVGILVS DPWLQNQFTQ VELRSLKSHF TSMKRESGKL TVSDLASRMG KSKVVGDQNL 60
61 SNEERATLIQ NFHPNLNDEV DFEFYLRIYL NLQAHVNAII GSGVKNSSAF LK
|
| Detection Method: |  |
| Confidence: | 22.0 |
| Match: | 2f2oA |
| Description: | Structure of calmodulin bound to a calcineurin peptide: a new way of making an old binding mode |
Matching Structure (courtesy of the PDB): |
|
|
Region A: Residues: [113-654] |
1 11 21 31 41 51
| | | | | |
1 AATTTLLHTI SDSEKSSYVA HINNYLSGDE FLNKCLPINP SSNDLFEVAK DGVLLCKLIN 60
61 VAVPGTIDER AINTKSMLNP WERNENHTLC LNSAKAIGCT VVNIGTQDII EGRRHLVLGV 120
121 ISQIIKIQLL ADLNLKKTPQ LVELVGDSKD VEELMSLPPE KILLRWMNFQ LRKTEYKKTV 180
181 TNFSSDVKDA EAYTNLLNVL APEHKNPSHL AVKSSFERAK LVLEHADKMG CRRYLTAKDI 240
241 VEGSPNLNLA FVAHIFQHRN GLSTQTKQIS FLENLADDIQ ISREEKAFRF WINSFDGSVY 300
301 INNVFEDLRD GWILLQTLDK VSPGIVNWKV SSKPPIKLPF KKVENCNQVV KLGKQLKFSL 360
361 VNIAGNDIVQ GNKKLILAYL WQLMRYNILQ LLKNLRLHSN GKEITDADIL EWANAKVRNN 420
421 GCKTRMYSFR DKSLSDGVFF LELLSSVQPR SVNWSLVTNG VTDEEKKMNA TYVISIARKL 480
481 GCSIFLLPED IIEVNQKMML TLTASIMYWT LKQPLHLNKP IGSPDSHNGS LLDDSTSDSS 540
541 IE
|
| Detection Method: | |
| Confidence: | 114.0 |
| Match: | 1pxyA |
| Description: | Crystal structure of the actin-crosslinking core of Arabidopsis fimbrin |
Matching Structure (courtesy of the PDB): |
|
| Term | Confidence | Notes |
| actin binding | 7.50245214720686 | bayes_pls_golite062009 |
| cytoskeletal protein binding | 6.48140000563569 | bayes_pls_golite062009 |
| actin filament binding | 5.47084878097979 | bayes_pls_golite062009 |
| tubulin binding | 4.22039137964246 | bayes_pls_golite062009 |
| microtubule binding | 4.15537672860167 | bayes_pls_golite062009 |
| binding | 2.8655705697659 | bayes_pls_golite062009 |
| structural constituent of cytoskeleton | 2.57886434162184 | bayes_pls_golite062009 |
| protein binding | 2.36488136094907 | bayes_pls_golite062009 |
| microtubule plus-end binding | 2.0465241878708 | bayes_pls_golite062009 |
| structural constituent of muscle | 1.32485442580942 | bayes_pls_golite062009 |
| structural molecule activity | 1.00964022808548 | bayes_pls_golite062009 |
