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Protein Overview: PPR64_ARATH

General Information:
Name(s) found: PPR64_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Pentatricopeptide repeat-containing protein At1g30610, chloroplastic OS=Arabidopsis thaliana GN=EMB2279 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 1006 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: suspensor development [IMP]
    embryonic development ending in seed dormancy [IMP][NAS][TAS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAVTISTNAF VNASLLDESR NSFWRPLFHQ PYYNCRRVVR LNSRKLNSKV MFCLNLNTKE  60
   61 VGLQKPGDKG FEFKPSFDQY LQIMESVKTA RKKKKFDRLK VEEDDGGGGN GDSVYEVKDM 120
  121 KIKSGELKDE TFRKRYSRQE IVSDKRNERV FKRNGEIENH RVATDLKWSK SGESSVALKL 180
  181 SKSGESSVTV PEDESFRKRY SKQEYHRSSD TSRGIERGSR GDELDLVVEE RRVQRIAKDA 240
  241 RWSKSRESSV AVKWSNSGES SVTMPKDESF RRRYSKQEHH RSSDTSRGIA RGSKGDELEL 300
  301 VVEERRVQRI AKDVRWSKSD ESLVPVSEDE SFRRGNPKQE MVRYQRVSDT SRGIERGSKG 360
  361 DGLDLLAEER RIERLANERH EIRSSKLSGT RRIGAKRNDD DDDSLFAMET PAFRFSDESS 420
  421 DIVDKPATSR VEMEDRIEKL AKVLNGADIN MPEWQFSKAI RSAKIRYTDY TVMRLIHFLG 480
  481 KLGNWRRVLQ VIEWLQRQDR YKSNKIRIIY TTALNVLGKS RRPVEALNVF HAMLLQISSY 540
  541 PDMVAYRSIA VTLGQAGHIK ELFYVIDTMR SPPKKKFKPT TLEKWDPRLE PDVVVYNAVL 600
  601 NACVQRKQWE GAFWVLQQLK QRGQKPSPVT YGLIMEVMLA CEKYNLVHEF FRKMQKSSIP 660
  661 NALAYRVLVN TLWKEGKSDE AVHTVEDMES RGIVGSAALY YDLARCLCSA GRCNEGLNMV 720
  721 NFVNPVVLKL IENLIYKADL VHTIQFQLKK ICRVANKPLV VTYTGLIQAC VDSGNIKNAA 780
  781 YIFDQMKKVC SPNLVTCNIM LKAYLQGGLF EEARELFQKM SEDGNHIKNS SDFESRVLPD 840
  841 TYTFNTMLDT CAEQEKWDDF GYAYREMLRH GYHFNAKRHL RMVLEASRAG KEEVMEATWE 900
  901 HMRRSNRIPP SPLIKERFFR KLEKGDHISA ISSLADLNGK IEETELRAFS TSAWSRVLSR 960
  961 FEQDSVLRLM DDVNRRLGSR SESSDSVLGN LLSSCKDYLK TRTHNL

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..286] PSI-BLAST 3.69897 Heavy meromyosin subfragment
    2 View Details [287..432] deduced N/A No confident structure predictions are available.
    3 View Details [433..888] PSI-BLAST 37.39794 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    4 View Details [889..1006] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle