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Protein Overview: VSR3_ARATH

General Information:
Name(s) found: VSR3_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T02602 vacuolar sorting receptor protein homolog At2g14740 - Arabidopsis thaliana [NCBI NR]
  • gi|71153403|sp|O80977.1|VSR3_ARATH RecName: Full=Vacuolar-sorting receptor 3; Short=AtVSR3; AltName: Full=Epidermal growth factor receptor-like protein 2a; Short=AtELP2a; AltName: Full=BP80-like protein a'; Short=AtBP80a'; Flags: Precursor [NCBI NR]
  • gi|3252813|gb|AAC24183.1| putative vacuolar sorting receptor [Arabidopsis thaliana] [NCBI NR]
  • gi|30679229|ref|NP_849955.1| ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding [Arabidopsis thaliana] [NCBI NR]
  • gi|20197383|gb|AAM15053.1| putative vacuolar sorting receptor [Arabidopsis thaliana] [NCBI NR]
  • gi|15225998|ref|NP_179081.1| ATVSR3 (ARABIDOPSIS THALIANA VACULOLAR SORTING RECEPTOR 3); calcium ion binding [Arabidopsis thaliana] [NCBI NR]
  • Vacuolar-sorting receptor 3 OS=Arabidopsis thaliana GN=VSR3 PE=2 SV=1 [Swiss-Prot]
  • (O80977) Putative vacuolar sorting receptor [athaliana3702.FASTAC.txt]
  • putative vacuolar sorting receptor [Arabidopsis thaliana]gi|3252813|gb|AAC24183.1| putative vacuolar sorting receptor [Arabidopsis thaliana]gi|7488423|pir||T02602 vacuolar sorting receptor protein homolog At2g14740 - Arabidopsis thalianagi|30679229|ref [nrdb_11152004_Chlamydomonas]
  • | Symbols: | vacuolar sorting receptor, putative | chr2:6315977-6319385 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • calcium ion binding / peptidase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Vacuolar sorting receptor 3 precursor (AtVSR3) (Epidermal growth factor receptor-like protein 2a) (AtELP2a) (BP80-like protein a') (AtBP80a') [nr-271106-contam.fasta]
  • putative vacuolar sorting receptor [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: ATVSR3, VSR3, VSR2;2, BP80-2;2 | vaculolar sorting receptor 3 | chr2:6308895-6312303 FORWARD LENGTH=628 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 628 amino acids

    Gene Ontology:
    Cellular Component: integral to plasma membrane [ISS]
    Golgi transport complex [IPI]
    membrane [IDA]
    Biological Process: intracellular protein transport [ISS]
    protein targeting to vacuole [ISS][TAS]
    Molecular Function: calcium ion binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKQLLCYLPW LLLLTLLVSP LNDARFVVEK NSLSVTSPES IKGTHDSAIG NFGIPQYGGS  60
   61 MAGTVVYPKE NQKSCKEFSD FSISFKSQPG ALPTFLLVDR GDCFFALKVW NAQKAGASAV 120
  121 LVADNVDEPL ITMDTPEEDV SSAKYIENIT IPSALVTKGF GEKLKKAISG GDMVNLNLDW 180
  181 REAVPHPDDR VEYELWTNSN DECGVKCDML MEFVKDFKGA AQILEKGGFT QFRPHYITWY 240
  241 CPHAFTLSRQ CKSQCINKGR YCAPDPEQDF SSGYDGKDVV VENLRQLCVY KVANETGKPW 300
  301 VWWDYVTDFQ IRCPMKEKKY NKECADSVIK SLGIDSKKLD KCMGDPDADL DNPVLKEEQD 360
  361 AQVGKGSRGD VTILPTLVVN NRQYRGKLEK SAVLKALCSG FEETTEPAIC LSTDVESNEC 420
  421 LDNNGGCWQD KSANITACKD TFRGRVCECP TVDGVQFKGD GYSHCEPSGP GRCTINNGGC 480
  481 WHEERDGHAF SACVDKDSVK CECPPGFKGD GTKKCEDINE CKEKKACQCP ECSCKNTWGS 540
  541 YECSCSGDLL YIRDHDTCIS KTGAQVRSAW AAVWLIMLSL GLAAAGAYLV YKYRLRQYMD 600
  601 SEIRAIMAQY MPLDSQPEIP NHVNDERA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..198] FFAS03 2.01 No description for 2ootA was found.
    2 View Details [199..628] PSI-BLAST 32.69897 Low density lipoprotein (LDL) receptor YWTD domain; Low density lipoprotein (LDL) receptor, different EGF domains; Ligand-binding domain of low-density lipoprotein receptor

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.286076792172079 bayes_pls_golite062009
  • protein binding
    		•  0.14494900666454 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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