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Protein Overview: gi|11357229, gi|...

General Information:
Name(s) found: gi|6996248 [NCBI NR]
gi|15230702 [NCBI NR]
gi|11357229 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|6996248|emb|CAB75474.1| clpC-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15230702|ref|NP_190131.1| Clp amino terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • pir||T47485 clpC-like protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: protein metabolic process [IEA]
    Molecular Function: ATP binding [ISS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFERFTEKAI KVITLAQEEA RRLGYNFFGT EHILLSLIGE GTGIAAKVLK SMGINLKDAR  60
   61 VEVEKIIGRG SGFVVVEIPF TPRKACAGFV TRGSSTTRHK GIAVRVLEIL GADPSNIRTQ 120
  121 VNAPILVNSQ QALVAEVMET ATWQVGNTRR GKLDPVVGRQ PQIKRVVQIL ARRTCRNNAC 180
  181 LIGKPGVGKR AIAEGIAQRI ASGDVPETIK GKMNVAGNCG WNEIRWRSRG KIEEVYGQSD 240
  241 DIILFIDEMH LLIGAGAVEG AIDAANILKP ALERCELQYR KHIENDPALE RRFQPVKVPE 300
  301 PTVEEAIQIT TVLAKGKEVN KADNEAEEGR PTVTEADNEA E

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 70.69897 Crystal Structure Analysis of ClpB

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.470983068319171 bayes_pls_golite062009
  • hydrolase activity
    		•  0.0582794297634999 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.96

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle