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View Structure Prediction Details

Protein: gi|11357229, gi|...
Organism: Arabidopsis thaliana
Length: 341 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|11357229, gi|....

Description E-value Query
Range
Subject
Range
gi|238713243, gi... - gi|77956726|ref|ZP_00820808.1| COG0542: ATPases with chaperone activity, ATP-binding subunit [Yersin...
299.0 [0..2] [337..3]

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Predicted Domain #1
Region A:
Residues: [1-341]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFERFTEKAI KVITLAQEEA RRLGYNFFGT EHILLSLIGE GTGIAAKVLK SMGINLKDAR  60
   61 VEVEKIIGRG SGFVVVEIPF TPRKACAGFV TRGSSTTRHK GIAVRVLEIL GADPSNIRTQ 120
  121 VNAPILVNSQ QALVAEVMET ATWQVGNTRR GKLDPVVGRQ PQIKRVVQIL ARRTCRNNAC 180
  181 LIGKPGVGKR AIAEGIAQRI ASGDVPETIK GKMNVAGNCG WNEIRWRSRG KIEEVYGQSD 240
  241 DIILFIDEMH LLIGAGAVEG AIDAANILKP ALERCELQYR KHIENDPALE RRFQPVKVPE 300
  301 PTVEEAIQIT TVLAKGKEVN KADNEAEEGR PTVTEADNEA E

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Detection Method: PSI-BLAST
Confidence: 70.69897
Match: 1qvrA
Description: Crystal Structure Analysis of ClpB
Matching Structure (courtesy of the PDB):

Predicted functions:

Term Confidence Notes
catalytic activity 0.470983068319171 bayes_pls_golite062009
hydrolase activity 0.0582794297634999 bayes_pls_golite062009

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle