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Protein Overview: PTR53_ARATH

General Information:
Name(s) found: PTR53_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • Protein NRT1/ PTR FAMILY 2.11 OS=Arabidopsis thaliana GN=NPF2.11 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 616 amino acids

    Gene Ontology:
    Cellular Component: membrane [ISS]
    plasma membrane [IDA]
    Biological Process: oligopeptide transport [ISS]
    Molecular Function: transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MERKPLELES TDNHQNPSSA VYGGSVTAVD SVEEDVQNQK KVVYRGWKVM PFIIGNETFE  60
   61 KLGIIGTLSN LLVYLTAVFN LKSITAATII NAFSGTINFG TFVAAFLCDT YFGRYKTLSV 120
  121 AVIACFLGSF VILLTAAVPQ LHPAACGTAA DSICNGPSGG QIAFLLMGLG FLVVGAGGIR 180
  181 PCNLAFGADQ FNPKSESGKR GIDSFFNWYF FTFTFAQILS LTLVVYVQSN VSWTIGLTIP 240
  241 AVLMFLACLI FFAGDKLYVK IKASGSPLAG IAQVIAVAIK KRGLKPAKQP WLNLYNYYPP 300
  301 KYANSKLKYT DQFRFLDKAA ILTPEDKLQP DGKPADPWKL CTMQQVEEVK CIVRVLPIWF 360
  361 ASSIYYLTIT QQMTYPVFQA LQSDRRLGSG GFVIPAATYV VFLMTGMTVF IVVYDRVLVP 420
  421 TMRRITGLDT GITLLQRIGT GIFFATASLV VAGFVEERRR TFALTKPTLG MAPRKGEISS 480
  481 MSAMWLIPQL SLAGVAEAFA AIGQMEFYYK QFPENMRSFA GSIFYVGGGV SSYLGSFLIA 540
  541 TVHRTTQNSS GGNWLAEDLN KGRLDLFYFM IAGILAVNFA YFLVMSRWYR YKGSDDEVTT 600
  601 YETNENIIKQ QDKNVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..63] PSI-BLAST 5.69897 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli
    2 View Details [64..409] PSI-BLAST 6.0 No description for 2gfpA was found.
    3 View Details [410..616] FFAS03 1.85 Crystal Structure of the Glycerol-3-Phosphate Transporter from E.Coli


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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