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Protein Overview: gi|4220447, gi|1...

General Information:
Name(s) found: gi|4220447 [NCBI NR]
gi|25315955 [NCBI NR]
gi|15218111 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|4220447|gb|AAD12674.1| Strong similarity to gb|X74814 cafeic acid 3-O-methyl transferase from Eucalyptus gunnii. [Arabidopsis thaliana] [NCBI NR]
  • pir||E96559 hypothetical protein F5F19.5 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15218111|ref|NP_175611.1| O-methyltransferase family 2 protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 363 amino acids

    Gene Ontology:
    Cellular Component: cytosol [TAS]
    Biological Process: lignin biosynthetic process [ISS]
    Molecular Function: O-methyltransferase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MISLQTSGGS SEEEDMLLAI QLGGLNFVPY IVKTARELDL FEIMAKARPL GSYLSPVDLA  60
   61 SMAAPKNPHA PMMIDRLLRF LVAYSVCTCK LVKDEEGRES RAYGLGKVGK KLIKDEDGFS 120
  121 IAPYVLAGCT KAKGGVWSYL TEAIQEGGAS AWERANEALI FEYMKKNENL KKIFNESMTN 180
  181 HTSIVMKKIL ENYIGFEGVS DFVDVGGSLG SNLAQILSKY PHIKGINFDL PHIVKEAPQI 240
  241 HGVEHIGGDM FDEIPRGEVI LMKWILHDWN DEKCVEILKN CKKALPETGR IIVIEMIVPR 300
  301 EVSETDLATK NSLSADLTMM SLTSGGKERT KKEFEDLAKE AGFKLPKIIY GAYSYWIIEL 360
  361 YPN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..363] PSI-BLAST 80.522879 Caffeic acid/5-hydroxyferulic acid 3/5-O-methyltransferase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.835523092977445 bayes_pls_golite062009
  • transferase activity, transferring one-carbon groups
    		•  0.54403439349476 bayes_pls_golite062009
  • methyltransferase activity
    		•  0.54389223881989 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.4843036104266 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.37117756729668 bayes_pls_golite062009
  • DNA binding
    		•  0.3118855114645 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle