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Protein Overview: gi|25296191, gi|...

General Information:
Name(s) found: gi|3834308 [NCBI NR]
gi|25296191 [NCBI NR]
gi|15219201 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • gi|3834308|gb|AAC83024.1| Strong similarity to glycoprotein EP1 gb|L16983 Daucus carota and a member of S locus glycoprotein family PF|00954. EST gb|AA720110 comes from this gene. [Arabidopsis thaliana] [NCBI NR]
  • pir||A96818 hypothetical protein F9K20.9 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15219201|ref|NP_178007.1| curculin-like (mannose-binding) lectin family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 443 amino acids

    Gene Ontology:
    Cellular Component: cell wall [IDA]
    plant-type cell wall [IDA]
    Biological Process: NONE FOUND
    Molecular Function: sugar binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFSTTLALF FTLSIFLVGA QAKVPVDDQF RVVNEGGYTD YSPIEYNPDV RGFVPFSDNF  60
   61 RLCFYNTTQN AYTLALRIGN RAQESTLRWV WEANRGSPVK ENATLTFGED GNLVLAEADG 120
  121 RVVWQTNTAN KGVVGIKILE NGNMVIYDSN GKFVWQSFDS PTDTLLVGQS LKLNGQNKLV 180
  181 SRLSPSVNAN GPYSLVMEAK KLVLYYTTNK TPKPIGYYEY EFFTKIAQLQ SMTFQAVEDA 240
  241 DTTWGLHMEG VDSGSQFNVS TFLSRPKHNA TLSFLRLESD GNIRVWSYST LATSTAWDVT 300
  301 YTAFTNDNTD GNDECRIPEH CLGFGLCKKG QCNACPSDIG LLGWDETCKI PSLASCDPKT 360
  361 FHYFKIEGAD SFMTKYNGGS TTTESACGDK CTRDCKCLGF FYNRKSSRCW LGYELKTLTK 420
  421 TGDTSLVAYV KAPNASKKSA LAI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..101] PSI-BLAST 18.0 Lectin (agglutinin)
    2 View Details [102..358] PSI-BLAST 13.221849 Fetuin-binding protein Scafet precursor
    3 View Details [359..443] MSA 10.245996 View MSA. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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