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Protein Overview: gi|10177383, gi|...

General Information:
Name(s) found: gi|15239808 [NCBI NR]
gi|10177383 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|15239808|ref|NP_199135.1| endo/excinuclease amino terminal domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|10177383|dbj|BAB10584.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 170 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: DNA repair [IEA][ISS]
    Molecular Function: nuclease activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLLSRTFP SVKLRDSNPK APEFKNLKNS QTQVPIPSSS SPQENSKIPK SKSWSVYLIL  60
   61 STTEPIKTYV GITTDFSRRL KQHNGEIRGG AKASSAGRPW LCACIITGFT CLSQASSFES 120
  121 KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..170] PSI-BLAST 21.69897 Solution NMR structure of the UPF0213 protein BH0048 from Bacillus halodurans. Northeast Structural Genomics target BhR2.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.63

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle