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View Structure Prediction Details

Protein: gi|10177383, gi|...
Organism: Arabidopsis thaliana
Length: 170 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for gi|10177383, gi|....

Description E-value Query
Range
Subject
Range
gi|109128179 - gi|109128179|ref|XP_001109511.1| PREDICTED: similar to GIY-YIG domain containing 2 isoform 1 isoform...
162.0 [0..51] [169..11]

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Predicted Domain #1
Region A:
Residues: [1-170]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTRLLSRTFP SVKLRDSNPK APEFKNLKNS QTQVPIPSSS SPQENSKIPK SKSWSVYLIL  60
   61 STTEPIKTYV GITTDFSRRL KQHNGEIRGG AKASSAGRPW LCACIITGFT CLSQASSFES 120
  121 KWKIFTRKLP RRKKDEDMSQ SDALLQHRRR ALNKVEESLD CSYLETDWKI 

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Detection Method: PSI-BLAST
Confidence: 21.69897
Match: 1zg2A
Description: Solution NMR structure of the UPF0213 protein BH0048 from Bacillus halodurans. Northeast Structural Genomics target BhR2.
Matching Structure (courtesy of the PDB):

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle