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Protein Overview: gi|9757719, gi|1...

General Information:
Name(s) found: gi|9757719 [NCBI NR]
gi|15237354 [NCBI NR]
Description(s) found:
Found 10 descriptions.
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  • gi|9757719|dbj|BAB08244.1| CRN (crooked neck) protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15237354|ref|NP_199411.1| crooked neck protein, putative / cell cycle protein, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 673 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA][ISS]
    Biological Process: RNA processing [IEA][ISS]
    Molecular Function: binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGKDAEVKL PRTTRVKNKT PAPVQITAEQ ILREARERQE AEIRPPKQKI TDSTELSDYR  60
   61 LRRRKEFEDQ IRRARWNIQV WVKYAKWEES QMDYARARSV WERALEGEYR NHTLWVKYAE 120
  121 FEMKNKFVNN ARNVWDRSVT LLPRVDQLWE KYIYMEEKLG NVTGARQIFE RWMNWSPDQK 180
  181 AWLCFIKFEL RYNEIERARS IYERFVLCHP KVSAFIRYAK FEMKRGGQVK LAREVYERAV 240
  241 DKLANDEEAE ILFVSFAEFE ERCKEVERAR FIYKFALDHI RKGRAEELYK KFVAFEKQYG 300
  301 DKEGIEDAIV GKKRFEYEDE VSKNPLNYDS WFDYVRLEES VGNKDRIREI YERAIANVPP 360
  361 AQEKRFWQRY IYLWINYALY EEIETKDVER TRDVYRECLK LIPHTKFSFA KIWLLAAEYE 420
  421 IRQLNLTGAR QILGNAIGKA PKVKIFKKYI EMELKLVNID RCRKLYERFL EWSPENCYAW 480
  481 RNYAEFEISL AETERARAIF ELAISQPALD MPELLWKTYI DFEISEGEFE KTRALYERLL 540
  541 DRTKHCKVWI SFAKFEASAS EHKEDGIKSA RVIFDRANTY YKDTTPELEE ERATLLEDWL 600
  601 NMETGFGELG DVSVVQSKLP KKLKKRKMTS REDGSTEYEE YFDYLFPEES GTTNLKILEA 660
  661 AYKWKKLKGE ECV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..158] PSI-BLAST 47.0 The superhelical TPR domain of O-linked GlcNAc transferase reveals structural similarities to importin alpha.
    2 View Details [159..673] PSI-BLAST 25.0 No description for 2gw1A was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle