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Protein Overview: gi|9755727, gi|3...

General Information:
Name(s) found: gi|9755727 [NCBI NR]
gi|30686005 [NCBI NR]
gi|11358924 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|9755727|emb|CAC01839.1| WD40-repeat protein [Arabidopsis thaliana] [NCBI NR]
  • gi|30686005|ref|NP_568338.2| TOZ (TORMOZEMBRYO DEFECTIVE); nucleotide binding [Arabidopsis thaliana] [NCBI NR]
  • pir||T51507 WD40-repeat protein - Arabidopsis thaliana [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 876 amino acids

    Gene Ontology:
    Cellular Component: nucleolus [IDA]
    Biological Process: cell division [IMP]
    embryonic development ending in seed dormancy [IMP]
    embryonic pattern specification [IMP]
    Molecular Function: nucleotide binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAPHSLKKNY RCSRSLKQFY GGGPFIVSSD GSFIACACGD VINIVDSTDS SVKSTIEGES  60
   61 DTLTALALSP DDKLLFSAGH SRQIRVWDLE TLKCIRSWKG HEGPVMGMAC HASGGLLATA 120
  121 GADRKVLVWD VDGGFCTHYF RGHKGVVSSI LFHPDSNKNI LISGSDDATV RVWDLNAKNT 180
  181 EKKCLAIMEK HFSAVTSIAL SEDGLTLFSA GRDKVVNLWD LHDYSCKATV ATYEVLEAVT 240
  241 TVSSGTPFAS FVASLDQKKS KKKESDSQAT YFITVGERGV VRIWKSEGSI CLYEQKSSDI 300
  301 TVSSDDEESK RGFTAAAMLP SDHGLLCVTA DQQFFFYSVV ENVEETELVL SKRLVGYNEE 360
  361 IADMKFLGDE EQFLAVATNL EEVRVYDVAT MSCSYVLAGH KEVVLSLDTC VSSSGNVLIV 420
  421 TGSKDKTVRL WNATSKSCIG VGTGHNGDIL AVAFAKKSFS FFVSGSGDRT LKVWSLDGIS 480
  481 EDSEEPINLK TRSVVAAHDK DINSVAVARN DSLVCTGSED RTASIWRLPD LVHVVTLKGH 540
  541 KRRIFSVEFS TVDQCVMTAS GDKTVKIWAI SDGSCLKTFE GHTSSVLRAS FITDGTQFVS 600
  601 CGADGLLKLW NVNTSECIAT YDQHEDKVWA LAVGKKTEMI ATGGGDAVIN LWHDSTASDK 660
  661 EDDFRKEEEA ILRGQELENA VLDAEYTKAI RLAFELCRPH KVFELFSGLC RKRDSDEQIV 720
  721 KALQGLEKEE FRLLFEYVRE WNTKPKLCHI AQFVLYKTFN ILPPTEIVQV KGIGELLEGL 780
  781 IPYSQRHFSR IDRFVRSSFL LDYTLGEMSV IDPETVETEY PKDEKKKEKD VIAAMEQDTD 840
  841 ELKQETPSRK RKSQKSKGKS NKKRLIAEAQ GSVIAV

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..57] PSI-BLAST 65.39794 Tup1, C-terminal domain
    2 View Details [58..331] PSI-BLAST 5.69897 No description for 2oajA was found.
    3 View Details [332..387] PSI-BLAST 33.045757 No description for 3bg0A was found.
    4 View Details [388..646] PSI-BLAST 10.69897 No description for 2vduB was found.
    5 View Details [647..706] PSI-BLAST 78.0 No description for 2ovpB was found.
    6 View Details [707..876] Pfam 39.468521 No description for PF08625.3 was found. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.80

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle