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Protein Overview: PSD7B_ARATH

General Information:
Name(s) found: PSD7B_ARATH [Swiss-Prot]
Description(s) found:
Found 15 descriptions.
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  • 26S proteasome non-ATPase regulatory subunit 7 homolog B OS=Arabidopsis thaliana GN=RPN8B PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 310 amino acids

    Gene Ontology:
    Cellular Component: nucleus [TAS]
    proteasome regulatory particle, lid subcomplex [ISS]
    Biological Process: embryonic development ending in seed dormancy [IMP]
    protein catabolic process [TAS]
    ubiquitin-dependent protein catabolic process [TAS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDVIKTQQIS ARTIEKVIVH PLVLLSIVDH YNRVAKDTSK RVVGVLLGSS SRGTVDVTNS  60
   61 YAVPFEEDDK DTSIWFLDHN YHESMFHMFK RINAKEHIVG WYSTGPKLRE NDLDVHALFN 120
  121 GYVPNPVLVI IDVQPKELGI PTKAYYAVEE VKENATQKSQ QVFVHVPTEI AAHEVEEIGV 180
  181 EHLLRDVKDT TISTLATEVT AKLTALKGLD ARLREIRTYL DLVIEGKLPL NHEILYHLQD 240
  241 VFNLLPNLNV NELVKAFAVK TNDMMLVIYL SSLIRSVIAL HSLINNKLLN KEHEKAEDSK 300
  301 PVDIPLITES

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..225] PSI-BLAST 49.69897 No description for 2o95A was found.
    2 View Details [226..310] MSA 2.126993 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle