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Protein Overview: FD4L2_ARATH

General Information:
Name(s) found: FD4L2_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|3445206|gb|AAC32436.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • pir||B84618 hypothetical protein At2g22890 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|15227763|ref|NP_179874.1| small conjugating protein ligase [Arabidopsis thaliana] [NCBI NR]
  • Fatty acid desaturase 4-like 2, chloroplastic OS=Arabidopsis thaliana GN=FAD4L2 PE=2 SV=1 [Swiss-Prot]
  • (O81006) At2g22890 protein [athaliana3702.FASTAC.txt]
  • unknown protein [Arabidopsis thaliana]gi|25370614|pir||B84618 hypothetical protein At2g22890 [imported] - Arabidopsis thalianagi|15227763|ref|NP_179874.1| expressed protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Expressed protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | small conjugating protein ligase | chr2:9749580-9750419 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | Kua-ubiquitin conjugating enzyme hybrid localisation domain | chr2:9742500-9743339 REVERSE LENGTH=279 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Kua-ubiquitin conjugating enzyme hybrid localisation domain-containing protein OS=Arabidopsis thaliana GN=At2g22890 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 279 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: regulation of protein metabolic process [IEA]
    post-translational protein modification [IEA]
    Molecular Function: small conjugating protein ligase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSLQTKYT LNPITNNIPR SHRPSFLRVT STTNSQPNHE MKLVVEQRLV NPPLSNDPTL  60
   61 QSTWTHRLWV AAGCTTVFVS FSKSIIGAFG SHLWLEPSLA GFAGYILADL GSGVYHWATD 120
  121 NYGDESTPLV GIHIEDSQDH HKCPWTITKR QFANNLHFMA RGTTLIVLPL DLAFDDHVVH 180
  181 GFVSMFAFCV LFCQLFHAWA HGTKSKLPPL VVGLQDIGLL VSRIHHMNHH RAPYNNNYCV 240
  241 VSGVWNKVLD ESNVFKAMEM VLYIQLGVRP RSWTEPNYE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..112] deduced N/A No confident structure predictions are available.
    2 View Details [113..279] MSA 6.026973 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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