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Protein Overview: gi|89274145, gi|...

General Information:
Name(s) found: gi|89274145 [NCBI NR]
gi|7770343 [NCBI NR]
gi|41618992 [NCBI NR]
gi|25405951 [NCBI NR]
gi|21555865 [NCBI NR]
gi|18402458 [NCBI NR]
Description(s) found:
Found 17 descriptions.
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  • gi|89274145|gb|ABD65593.1| At1g49010 [Arabidopsis thaliana] [NCBI NR]
  • gi|7770343|gb|AAF69713.1|AC016041_18 F27J15.20 [Arabidopsis thaliana] [NCBI NR]
  • gi|41618992|gb|AAS09998.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • pir||F96527 protein F27J15.20 [imported] - Arabidopsis thaliana [NCBI NR]
  • gi|21555865|gb|AAM63950.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|18402458|ref|NP_564537.1| myb family transcription factor [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 314 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to gibberellin stimulus [IEP]
    response to salt stress [IEP]
    response to jasmonic acid stimulus [IEP]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MESVVATWSR EEEKAFENAI ALHCVEEEIT EDQWNKMSSM VPSKALEEVK KHYQILLEDV  60
   61 KAIENGQVPL PRYHHRKGLI VDEAAAAATS PANRDSHSSG SSEKKPNPGT SGISSSNGGR 120
  121 SGGSRAEQER RKGIPWTEEE HRLFLLGLDK FGKGDWRSIS RNFVISRTPT QVASHAQKYF 180
  181 IRLNSMNRDR RRSSIHDITT VNNQAPAVTG GGQQPQVVKH RPAQPQPQPQ PQPQQHHPPT 240
  241 MAGLGMYGGA PVGQPIIAPP DHMGSAVGTP VMLPPPMGTH HHHHHHHLGV APYAVPAYPV 300
  301 PPLPQQHPAP STMH

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..186] PSI-BLAST 35.0 c-Myb, DNA-binding domain
    2 View Details [187..314] FFAS03 1.64 Crystal Structure of Rat Synapsin I C Domain Complexed to Ca.ATP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.95

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle