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Protein Overview: gi|21554875, gi|...

General Information:
Name(s) found: gi|21554875 [NCBI NR]
gi|20197359 [NCBI NR]
gi|18491139 [NCBI NR]
gi|18400976 [NCBI NR]
gi|13605561 [NCBI NR]
Description(s) found:
Found 16 descriptions.
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  • gi|21554875|gb|AAM63716.1| unknown [Arabidopsis thaliana] [NCBI NR]
  • gi|20197359|gb|AAC42241.2| expressed protein [Arabidopsis thaliana] [NCBI NR]
  • gi|18491139|gb|AAL69538.1| At2g25910/F17H15.6 [Arabidopsis thaliana] [NCBI NR]
  • gi|18400976|ref|NP_565612.1| 3'-5' exonuclease domain-containing protein / K homology domain-containing protein / KH domain-containing protein [Arabidopsis thaliana] [NCBI NR]
  • gi|13605561|gb|AAK32774.1|AF361606_1 At2g25910/F17H15.6 [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 341 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: nucleobase, nucleoside, nucleotide and nucleic acid metabolic process [IEA]
    Molecular Function: nucleic acid binding [IEA]
    3'-5' exonuclease activity [IEA]
    RNA binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASSSPTQLA HVPIPPEPGG RSPTQEANEP PVPIYIVTDP FQLPADFLNP SPEKKLVIGF  60
   61 DCEGVDLCRH GKLCIMQIAF SNAIYLVDVI EGGEVIMKAC KPALESNYIT KVIHDCKRDS 120
  121 EALYFQFGIR LHNVVDTQIA YSLIEEQEGR RRPLDDYISF VSLLADPRYC GISYEEKEEV 180
  181 RVLMRQDPKF WTYRPMTELM IRAAADDVRF LLYLYHKMMG KLNQRSLWHL AVRGALYCRC 240
  241 LCCMNDADFA DWPTVPPIPD NLKSEDQCLE EEILSVLDVP PGKMGRVIGR KGASILAIKE 300
  301 ACNAEILIGG AKGPPDKIFV IGPVREVRKA EAILRGRMID Y

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..341] PSI-BLAST 57.0 STRUCTURE OF LARGE FRAGMENT OF ESCHERICHIA COLI DNA POLYMERASE I COMPLEXED WITH D/TMP


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle