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Protein Overview: HDG12_ARATH

General Information:
Name(s) found: HDG12_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Homeobox-leucine zipper protein HDG12 OS=Arabidopsis thaliana GN=HDG12 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 687 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IEA][ISS]
    Biological Process: regulation of transcription, DNA-dependent [ISS]
    trichome branching [IGI]
    Molecular Function: transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEFLGDSQNH DSSETEKKNK KKKRFHRHTP HQIQRLESTF NECQHPDEKQ RNQLSRELGL  60
   61 APRQIKFWFQ NRRTQKKAQH ERADNCALKE ENDKIRCENI AIREAIKHAI CPSCGDSPVN 120
  121 EDSYFDEQKL RIENAQLRDE LERVSSIAAK FLGRPISHLP PLLNPMHVSP LELFHTGPSL 180
  181 DFDLLPGSCS SMSVPSLPSQ PNLVLSEMDK SLMTNIAVTA MEELLRLLQT NEPLWIKTDG 240
  241 CRDVLNLENY ENMFTRSSTS GGKKNNLGME ASRSSGVVFT NAITLVDMLM NSVKLTELFP 300
  301 SIVASSKTLA VISSGLRGNH GDALHLMIEE LQVLSPLVTT REFCVLRYCQ QIEHGTWAIV 360
  361 NVSYEFPQFI SQSRSYRFPS GCLIQDMSNG YSKVTWVEHG EFEEQEPIHE MFKDIVHKGL 420
  421 AFGAERWIAT LQRMCERFTN LLEPATSSLD LGGVIPSPEG KRSIMRLAHR MVSNFCLSVG 480
  481 TSNNTRSTVV SGLDEFGIRV TSHKSRHEPN GMVLCAATSF WLPISPQNVF NFLKDERTRP 540
  541 QWDVLSNGNS VQEVAHITNG SNPGNCISVL RGFNASSSQN NMLILQESCI DSSSAALVIY 600
  601 TPVDLPALNI AMSGQDTSYI PILPSGFAIS PDGSSKGGGS LITVGFQIMV SGLQPAKLNM 660
  661 ESMETVNNLI NTTVHQIKTT LNCPSTA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..70] PSI-BLAST 19.69897 Paired protein
    2 View Details [71..193] deduced N/A No confident structure predictions are available.
    3 View Details [194..449] FFAS03 2.79 No description for 2r55A was found.
    4 View Details [450..572] deduced N/A No confident structure predictions are available.
    5 View Details [573..687] MSA 2.055976 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle