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Protein Overview: Y3903_ARATH

General Information:
Name(s) found: Y3903_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • BTB/POZ domain-containing protein At3g09030 OS=Arabidopsis thaliana GN=At3g09030 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 460 amino acids

    Gene Ontology:
    Cellular Component: voltage-gated potassium channel complex [IEA][ISS]
    membrane [IEA][ISS]
    Biological Process: potassium ion transport [IEA][ISS]
    Molecular Function: voltage-gated potassium channel activity [IEA][ISS]
    protein binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVSDGGKRV KLNVGGEIFE TNASTIQSSC PDSLLAALST STSHGSNPVF IDRDPEIFAV  60
   61 ILNLLRTGRL PANSSGVFSK QELLDEAMYY GVESLLRLAM LPPPLLGFDA SLVSTIVPAA 120
  121 DGVPSALTAT AGDASLWIAH GGQISVYDWS LSHAGTVRTH LNDITSICRV WGEAAAIGSG 180
  181 SASGLHFYDL SGGRYIGSTH WTDPEDPRIH KARVAAVADS EGGVFASFDC LHRENSVLQI 240
  241 DKSTLQVAAV IGQQSGNSAK TTVPEKLRWL PAKGLLVGSA VQRGVFGCSG YIRIWDPRSR 300
  301 NIVWETNEPG SGRSTRFGDA LADMDVDVED SILFKVCSKS GDLGMADIRK LGEDPWVYMS 360
  361 DENPGAWKAG DGGGYSVVHC YRKQVLAARG GALEVWSSVK EKTSGDPIRR RNFVDKEDDS 420
  421 KRGMISKIEA GGDRLFVSRE CMEGVEVWET SSFSGVVSVE

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..253] PSI-BLAST 45.30103 Mammalian Shaker Kv1.2 potassium channel- beta subunit complex
    2 View Details [254..374] MSA 2.094989 View MSA. No confident structure predictions are available.
    3 View Details [375..460] deduced N/A No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle