YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: CAPP3_ARATH

General Information:
Name(s) found: CAPP3_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
SHOW ALL
  • Phosphoenolpyruvate carboxylase 3 OS=Arabidopsis thaliana GN=PPC3 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 968 amino acids

    Gene Ontology:
    Cellular Component: cytosol [IDA]
    Biological Process: tricarboxylic acid cycle [ISS]
    Molecular Function: phosphoenolpyruvate carboxylase activity [IDA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAGRNIEKMA SIDAQLRQLV PAKVSEDDKL VEYDALLLDR FLDILQDLHG EDLRETVQEL  60
   61 YELSAEYEGK REPSKLEELG SVLTSLDPGD SIVISKAFSH MLNLANLAEE VQIAHRRRIK 120
  121 KLKKGDFVDE SSATTESDIE ETFKRLVSDL GKSPEEIFDA LKNQTVDLVL TAHPTQSVRR 180
  181 SLLQKHGRIR DCLAQLYAKD ITPDDKQELD ESLQREIQAA FRTDEIRRTP PTPQDEMRAG 240
  241 MSYFHETIWK GVPKFLRRVD TALKNIGIDE RVPYNAPLIQ FSSWMGGDRD GNPRVTPEVT 300
  301 RDVCLLARMM AANLYYNQIE NLMFELSMWR CTDEFRVRAD ELHRNSRKDA AKHYIEFWKT 360
  361 IPPTEPYRVI LGDVRDKLYH TRERSRQLLS NGISDIPEEA TFTNVEQFLE PLELCYRSLC 420
  421 SCGDSPIADG SLLDFLRQVS TFGLSLVRLD IRQESERHTD VLDAITKHLD IGSSYRDWSE 480
  481 EGRQEWLLAE LSGKRPLFGP DLPKTEEISD VLDTFKVISE LPSDCFGAYI ISMATSPSDV 540
  541 LAVELLQREC HVKNPLRVVP LFEKLADLEA APAAVARLFS IDWYKNRING KQEVMIGYSD 600
  601 SGKDAGRLSA AWELYKAQEE LVKVAKKYGV KLTMFHGRGG TVGRGGGPTH LAILSQPPDT 660
  661 VNGSLRVTVQ GEVIEQSFGE AHLCFRTLQR FTAATLEHGM NPPISPKPEW RALLDEMAVV 720
  721 ATEEYRSVVF QEPRFVEYFR LATPELEYGR MNIGSRPSKR KPSGGIESLR AIPWIFAWTQ 780
  781 TRFHLPVWLG FGAAFRYAIK KDVRNLHMLQ DMYKQWPFFR VTIDLIEMVF AKGDPGIAAL 840
  841 YDKLLVSEDL WAFGEKLRAN FDETKNLVLQ TAGHKDLLEG DPYLKQRLRL RDSYITTLNV 900
  901 CQAYTLKRIR DANYNVTLRP HISKEIMQSS KSAQELVKLN PTSEYAPGLE DTLILTMKGI 960
  961 AAGLQNTG

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..968] PSI-BLAST 1000.0 Phosphoenolpyruvate carboxylase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  2.96882793316847 bayes_pls_golite062009
  • 3-methyl-2-oxobutanoate hydroxymethyltransferase activity
    		•  1.14607009350249 bayes_pls_golite062009
  • isocitrate lyase activity
    		•  0.788938993856531 bayes_pls_golite062009
  • lyase activity
    		•  0.70986506551964 bayes_pls_golite062009
  • transferase activity
    		•  0.5687068385416 bayes_pls_golite062009
  • oxo-acid-lyase activity
    		•  0.404868472347919 bayes_pls_golite062009
  • carbon-carbon lyase activity
    		•  0.36217387205482 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.89

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle