YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: PUB19_ARATH

General Information:
Name(s) found: PUB19_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
SHOW ALL
  • U-box domain-containing protein 19 OS=Arabidopsis thaliana GN=PUB19 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 686 amino acids

    Gene Ontology:
    Cellular Component: ubiquitin ligase complex [IEA]
    Biological Process: protein ubiquitination [IEA]
    Molecular Function: ubiquitin-protein ligase activity [IEA]
    zinc ion binding [IEA]
    protein binding [IEA]
    binding [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MIHTPTGSSR RILTFPAVNP CESISLTTLV DSLLQLAGEI LSFKPKHFST NKRSVKETLR  60
   61 HVQTLVIFFE ELRIQIRVGS IPAGRSVILS LSELHVIFQK LKFLLDDCTR DGAKLYMLMN 120
  121 SGQVSAHFRD LTRSISTSLD TFPVRSVDLP GEVNELIYLV MRQTRKSEAR PDRDDKRAID 180
  181 SVYWFFNLFE NRINPNSDEI LRVLDHIGVR KWRDCVKEID FLREEISVGK KSNIEIELLS 240
  241 NLMGFICYCR CVILRGIDVD DEEKDKEEDD LMMVRSLNVD DLRCPISLEI MSDPVVLESG 300
  301 HTYDRSSITK WFASGNITCP KTGKTLVSTV LVDNFSVKQV IQSYSKQNGV VMGQKGKKKV 360
  361 DVAESLAAEE AGKLTAEFLA GELIKGDEEE MVKALVEIRI LTKTSTFYRS CLVEAGVVES 420
  421 LMKILRSDDP RIQENAMAGI MNLSKDIAGK TRIVGEDGGG LRLIVEVLND GARRESRQYA 480
  481 AAALFYLSSL GDYSRLIGEI SDAIPGLVRI VKSCDYGDSA KRNALIAIRS LLMNQPDNHW 540
  541 RILAAGIVPV LLDLVKSEEI SDGVTADSMA ILAKMAEYPD GMISVLRRGG LKLAVKILGS 600
  601 SEVSPATKQH CVALLLNLCH NGGSDVVGSL AKNPSIMGSL YTASSNGELG GGKKASALIK 660
  661 MIHEFQERKT GPGEPVLERE RFVHAW

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 24.69897 No description for 2qizA was found.
    2 View Details [170..686] PSI-BLAST 29.39794 beta-Catenin

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.373576425899935 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.83

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle