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Protein Overview: C3H15_ARATH

General Information:
Name(s) found: C3H15_ARATH [Swiss-Prot]
Description(s) found:
Found 16 descriptions.
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  • Zinc finger CCCH domain-containing protein 15 OS=Arabidopsis thaliana GN=At1g68200 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 308 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: regulation of transcription [TAS]
    Molecular Function: nucleic acid binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MENKIAPFSY SGSSAGNSSS GGVVSSSLYS DQLYKSTRNI MQQRQDMVNR EALCYTRLHE  60
   61 ASLEAEALRL ENTELRSMNL RLKNELNSLI RSSIQNRFDH RSPLRMLSNL SIGGNDADEV 120
  121 ENQNRTVNRD DVNDKSPTSV MENEDLNRSS LPKSISVRSN GYSKASQGGG GAAAQSGKPR 180
  181 GTVTKPGTCG QVSTTQKVYV RGGGKKEDQE EEIEVEVYNQ GMTKTELCNK WQETGTCPYG 240
  241 DHCQFAHGIK ELRPVIRHPR YKTEVCRMVL AGDNCPYGHR CHFRHSLSEQ EKLVAAGFKP 300
  301 KSSLKLIT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..146] FFAS03 2.42 C/ebp beta
    2 View Details [147..205] deduced N/A No confident structure predictions are available.
    3 View Details [206..308] PSI-BLAST 18.0 Structural Basis for Recognition of the mRNA Class II AU-Rich Element by the Tandem Zinc Finger Domain of TIS11d


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.86

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle