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Protein Overview: SBT12_ARATH

General Information:
Name(s) found: SBT12_ARATH [Swiss-Prot]
Description(s) found:
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  • pir||T00962 hypothetical protein F20D22.12 - Arabidopsis thaliana [NCBI NR]
  • gi|3142298|gb|AAC16749.1| Strong similarity to protein SBT1 gb|X98929 from Lycopersicum esculentum [Arabidopsis thaliana] [NCBI NR]
  • gi|18379242|ref|NP_563701.1| SDD1 (STOMATAL DENSITY AND DISTRIBUTION); serine-type endopeptidase [Arabidopsis thaliana] [NCBI NR]
  • Subtilisin-like protease SDD1 OS=Arabidopsis thaliana GN=SDD1 PE=2 SV=1 [Swiss-Prot]
  • Subtilisin-like protease SBT1.2 OS=Arabidopsis thaliana GN=SBT1.2 PE=2 SV=1 [Swiss-Prot]
  • (O64495) F20D22.12 protein [athaliana3702.FASTAC.txt]
  • Strong similarity to protein SBT1 gb|X98929 from Lycopersicum esculentum. [Arabidopsis thaliana]gi|18379242|ref|NP_563701.1| subtilase family protein [Arabidopsis thaliana]gi|7435666|pir||T00962 hypothetical protein F20D22.12 - Arabidopsis thaliana [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Subtilase family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: SDD1 | SDD1 (STOMATAL DENSITY AND DISTRIBUTION); subtilase | chr1:1061456-1063783 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • Strong similarity to protein SBT1 gb|X98929 from Lycopersicum esculentum. [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • SDD1 (STOMATAL DENSITY AND DISTRIBUTION); subtilase [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: SDD1 | Subtilase family protein | chr1:1061457-1063784 REVERSE LENGTH=775 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 775 amino acids

    Gene Ontology:
    Cellular Component: external side of plasma membrane [IDA]
    Biological Process: proteolysis [ISS]
    stomatal complex morphogenesis [IMP]
    regulation of cell proliferation [IMP]
    Molecular Function: serine-type endopeptidase activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEPKPFFLCI IFLLFCSSSS EILQKQTYIV QLHPNSETAK TFASKFDWHL SFLQEAVLGV  60
   61 EEEEEEPSSR LLYSYGSAIE GFAAQLTESE AEILRYSPEV VAVRPDHVLQ VQTTYSYKFL 120
  121 GLDGFGNSGV WSKSRFGQGT IIGVLDTGVW PESPSFDDTG MPSIPRKWKG ICQEGESFSS 180
  181 SSCNRKLIGA RFFIRGHRVA NSPEESPNMP REYISARDST GHGTHTASTV GGSSVSMANV 240
  241 LGNGAGVARG MAPGAHIAVY KVCWFNGCYS SDILAAIDVA IQDKVDVLSL SLGGFPIPLY 300
  301 DDTIAIGTFR AMERGISVIC AAGNNGPIES SVANTAPWVS TIGAGTLDRR FPAVVRLANG 360
  361 KLLYGESLYP GKGIKNAGRE VEVIYVTGGD KGSEFCLRGS LPREEIRGKM VICDRGVNGR 420
  421 SEKGEAVKEA GGVAMILANT EINQEEDSID VHLLPATLIG YTESVLLKAY VNATVKPKAR 480
  481 IIFGGTVIGR SRAPEVAQFS ARGPSLANPS ILKPDMIAPG VNIIAAWPQN LGPTGLPYDS 540
  541 RRVNFTVMSG TSMSCPHVSG ITALIRSAYP NWSPAAIKSA LMTTADLYDR QGKAIKDGNK 600
  601 PAGVFAIGAG HVNPQKAINP GLVYNIQPVD YITYLCTLGF TRSDILAITH KNVSCNGILR 660
  661 KNPGFSLNYP SIAVIFKRGK TTEMITRRVT NVGSPNSIYS VNVKAPEGIK VIVNPKRLVF 720
  721 KHVDQTLSYR VWFVLKKKNR GGKVASFAQG QLTWVNSHNL MQRVRSPISV TLKTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..118] PSI-BLAST 32.0 No description for 2p4eP was found.
    2 View Details [119..775] PSI-BLAST 44.221849 Structure of C5a peptidase- a key virulence factor from Streptococcus


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle