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Protein Overview: DOT3_ARATH

General Information:
Name(s) found: DOT3_ARATH [Swiss-Prot]
Description(s) found:
Found 12 descriptions.
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  • BTB/POZ domain-containing protein DOT3 OS=Arabidopsis thaliana GN=DOT3 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 607 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: phloem or xylem histogenesis [IMP]
    shoot development [IMP]
    primary root development [IMP]
    cotyledon vascular tissue pattern formation [IMP]
    leaf vascular tissue pattern formation [IMP]
    response to light stimulus [ISS]
    Molecular Function: protein binding [IEA]
    signal transducer activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNSVSAAERL KSFGDAGPVC NKSIIFPSRV VTLANSFEKK DRSWYVKSQI PTDLSIQVND  60
   61 ITFKAHKFPL ISKCGYISSI ELKPSTSENG YHLKLENFPG GADTFETILK FCYNLPLDLN 120
  121 PLNVAPLRCA SEYLYMTEEF EAGNLISKTE AFITFVVLAS WRDTLTVLRS CTNLSPWAEN 180
  181 LQIVRRCCDL LAWKACNDNN IPEDVVDRNE RCLYNDIATL DIDHFMRVIT TMKARRAKPQ 240
  241 ITGKIIMKYA DNFLPVINDD LEGIKGYGLG KNELQFSVNR GRMEESNSLG CQEHKETIES 300
  301 LVSVLPPQSG AVSCHFLLRM LKTSIVYSAS PALISDLEKR VGMALEDANV CDLLIPNFKN 360
  361 EEQQERVRIF EFFLMHEQQQ VLGKPSISKL LDNYLAEIAK DPYLPITKFQ VLAEMLPENA 420
  421 WKCHDGLYRA IDMFLKTHPS LSDHDRRRLC KTMNCEKLSL DACLHAAQND RLPLRTIVQI 480
  481 NTQVLFSEQV KMRMMMQDKL PEKEEENSGG REDKRMSRDN EIIKTLKEEL ENVKKKMSEL 540
  541 QSDYNELQQE YERLSSKQKS SHNWGLRWQK VKKSFQTKRE DEETRERTRR RSSTGQRTSF 600
  601 RRRMSMS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..169] PSI-BLAST 16.045757 No description for 2ihcA was found.
    2 View Details [170..373] MSA 4.624986 View MSA. No confident structure predictions are available.
    3 View Details [374..440] MSA 1.193985 View MSA. Confident ab initio structure predictions are available.
    4 View Details [441..498] MSA 2.074989 View MSA. No confident structure predictions are available.
    5 View Details [499..607] MSA 1.071984 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle