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Protein Overview: CP18B_ARATH

General Information:
Name(s) found: CP18B_ARATH [Swiss-Prot]
Description(s) found:
Found 17 descriptions.
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  • Peptidyl-prolyl cis-trans isomerase CYP18-2 OS=Arabidopsis thaliana GN=CYP18-2 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 164 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: protein folding [ISS]
    Molecular Function: peptidyl-prolyl cis-trans isomerase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSARPEGSPP EVTLETSMGP FTVEMYYKHS PRTCRNFLEL SRRGYYDNVL FHRIVKDFIV  60
   61 QGGDPTGTGR GGESIYGSKF EDEINKELKH TGAGILSMAN AGPNTNGSQF FITLAPQPSL 120
  121 DGKHTIFGRV CRGMEVIKRL GSVQTDNTDR PIHEVKILRT KVID

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..164] PSI-BLAST 54.522879 solution structure of cyclophilin like 1(PPIL1) and insights into its interaction with SKIP

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • peptidyl-prolyl cis-trans isomerase activity
    		•  3.73853378771688 bayes_pls_golite062009
  • cis-trans isomerase activity
    		•  3.66963215732405 bayes_pls_golite062009
  • isomerase activity
    		•  1.96529188741504 bayes_pls_golite062009
  • binding
    		•  1.46018233647024 bayes_pls_golite062009
  • unfolded protein binding
    		•  1.38124355054041 bayes_pls_golite062009
  • RNA binding
    		•  1.36609500767021 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.939772862764466 bayes_pls_golite062009
  • catalytic activity
    		•  0.748655649755714 bayes_pls_golite062009
  • mRNA binding
    		•  0.210589563207907 bayes_pls_golite062009
  • protein binding
    		•  0.130251391659493 bayes_pls_golite062009
  • hydrolase activity
    		•  0.126773806019757 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle