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Protein Overview: NINJA_ARATH

General Information:
Name(s) found: NINJA_ARATH [Swiss-Prot]
Description(s) found:
Found 22 descriptions.
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  • AFP homolog 2 OS=Arabidopsis thaliana GN=AFPH2 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 425 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: response to jasmonic acid stimulus [IEP]
    jasmonic acid mediated signaling pathway [IMP]
    Molecular Function: protein binding [IPI]
    transcription repressor activity [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDNGLELS LGLSCGGSTG KAKGNNNNNA GSSSENYRAE GGDRSAKVID DFKNFLHPTS  60
   61 QRPAEPSSGS QRSDSGQQPP QNFFNDLSKA PTTEAEASTK PLWVEDESRK EAGNKRKFGF 120
  121 PGMNDDKKKE KDSSHVDMHE KKTKASHVST ATDEGSTAEN EDVAESEVGG GSSSNHAKEV 180
  181 VRPPTDTNIV DNLTGQRRSN HGGSGTEEFT MRNMSYTVPF TVHPQNVVTS MPYSLPTKES 240
  241 GQHAAATSLL QPNANAGNLP IMFGYSPVQL PMLDKDGSGG IVALSQSPFA GRVPSNSATA 300
  301 KGEGKQPVAE EGSSEDASER PTGDNSNLNT AFSFDFSAIK PGMAADVKFG GSGARPNLPW 360
  361 VSTTGSGPHG RTISGVTYRY NANQIKIVCA CHGSHMSPEE FVRHASEEYV SPESSMGMTA 420
  421 ASAHT

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..287] deduced N/A No confident structure predictions are available.
    2 View Details [288..425] MSA 5.015969 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle