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View Structure Prediction Details

Protein: NINJA_ARATH
Organism: Arabidopsis thaliana
Length: 425 amino acids
Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16



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Top Sequence Alignment Hits

Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for NINJA_ARATH.

Description E-value Query
Range
Subject
Range
gi|15451184 - gi|15451184|gb|AAK96863.1| putative protein [Arabidopsis thaliana]
593.0 [0..1] [425..1]

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Predicted Domain #1
Region A:
Residues: [1-287]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDDDNGLELS LGLSCGGSTG KAKGNNNNNA GSSSENYRAE GGDRSAKVID DFKNFLHPTS  60
   61 QRPAEPSSGS QRSDSGQQPP QNFFNDLSKA PTTEAEASTK PLWVEDESRK EAGNKRKFGF 120
  121 PGMNDDKKKE KDSSHVDMHE KKTKASHVST ATDEGSTAEN EDVAESEVGG GSSSNHAKEV 180
  181 VRPPTDTNIV DNLTGQRRSN HGGSGTEEFT MRNMSYTVPF TVHPQNVVTS MPYSLPTKES 240
  241 GQHAAATSLL QPNANAGNLP IMFGYSPVQL PMLDKDGSGG IVALSQS

[Run NCBI BLAST on this sequence.]

Detection Method: deduced

Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.

Predicted Domain #2
Region A:
Residues: [288-425]
      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PFAGRVPSNS ATAKGEGKQP VAEEGSSEDA SERPTGDNSN LNTAFSFDFS AIKPGMAADV  60
   61 KFGGSGARPN LPWVSTTGSG PHGRTISGVT YRYNANQIKI VCACHGSHMS PEEFVRHASE 120
  121 EYVSPESSMG MTAASAHT

[Run NCBI BLAST on this sequence.]

Detection Method: MSA

Shown below is our most confident prediction for this domain.
Click here to view all matches.

Found no confident structure predictions for this domain.


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