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Protein Overview: gi|7484883, gi|7...

General Information:
Name(s) found: gi|7484883 [NCBI NR]
gi|7268688 [NCBI NR]
gi|2832622 [NCBI NR]
gi|22136634 [NCBI NR]
gi|15234071 [NCBI NR]
Description(s) found:
Found 15 descriptions.
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  • pir||T05031 cyclic phosphodiesterase homolog F13C5.110 - Arabidopsis thaliana [NCBI NR]
  • gi|7268688|emb|CAB78896.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|2832622|emb|CAA16751.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|22136634|gb|AAM91636.1| unknown protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15234071|ref|NP_193629.1| cyclic phosphodiesterase, putative [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 196 amino acids

    Gene Ontology:
    Cellular Component: intracellular [IEA]
    Biological Process: RNA metabolic process [IEA]
    Molecular Function: catalytic activity [IEA]
    cyclic-nucleotide phosphodiesterase activity [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTEENATPLQ PPQTQEDDEE EKAMYAIWAV PEDDVEDRLQ RLMEGLRSEF GGPAFDPHLT  60
   61 LVGPFPYKLT ASEAKRMFKS ACEGFKVYPA TVDQVSAGTS YFQCLYVSLR HTVEVMNAAG 120
  121 HFMAHFKPFT GKFYVPHMSI LYGDLTEREK KKALEKAYTL DSSLDGLNFK INRVALWITD 180
  181 ADVGSWVKVD EHTLIS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..196] PSI-BLAST 71.221849 tRNA splicing product Appr>p cyclic nucleotide phosphodiesterase

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • catalytic activity
    		•  0.372436499192166 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle