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Protein Overview: TRP4_ARATH

General Information:
Name(s) found: TRP4_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • Telomere repeat-binding protein 4 OS=Arabidopsis thaliana GN=TRP4 PE=1 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 640 amino acids

    Gene Ontology:
    Cellular Component: nucleus [ISS]
    chromosome, telomeric region [IDA]
    Biological Process: telomere maintenance [TAS]
    Molecular Function: DNA binding [IDA][ISS]
    double-stranded telomeric DNA binding [IDA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVVKRKLNCG GSNGFDFPNI PKAPRSSRRK VSGKRSDDES EICAIDLLAS LAGKLLEESE  60
   61 SSSTSTYASE ADNLDHLGGL IKQELEDGYT TKPCKSEFFD PGNPASKSTS ENTSVTCLPF 120
  121 SSFENDCILE QTPVSDCKRA SGLKSLVGSI TEETCVVNED AGSEQGANTF SLKDPSQLHS 180
  181 QSPESVLLDG DVKLAPCTDQ VPNDSFKGYR NHSKLVCRDD DENYCKYYKF SDKCKSYRPL 240
  241 SRVGNRRIMQ SVRAISKLKC FEDTRTDGRL KALYRKRKLC YGYNPWKRET IHRKRRLSDK 300
  301 GLVVNYDGGL SSESVSNSPE KGESENGDFS AAKIGLLSKD SRVKFSIKSL RIPELVIEVP 360
  361 ETATVGLLKR TVKEAVTALL GGGIRIGVLV QGKKVRDDNN TLSQTGLSCR ENLGNLGFTL 420
  421 EPGLETLPVP LCSETPVLSL PTDSTKLSER SAASPALETG IPLPPQDEDY LINLGNSVEN 480
  481 NDELVPHLSD IPADEQPSSD SRALVPVLAL ESDALALVPV NEKPKRTELS QRRTRRPFSV 540
  541 TEVEALVSAV EEVGTGRWRD VKLRSFENAS HRTYVDLKDK WKTLVHTASI SPQQRRGEPV 600
  601 PQELLDRVLG AHRYWTQHQM KQNGKHQVAT TMVVEAGSSM

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..90] deduced N/A No confident structure predictions are available.
    2 View Details [91..320] deduced N/A No confident structure predictions are available.
    3 View Details [321..422] FFAS03 1.12 Solution Structure of the Ubiquitin-like Domain from Mouse Hypothetical 1700011N24Rik Protein
    4 View Details [423..530] deduced N/A No confident structure predictions are available.
    5 View Details [531..640] PSI-BLAST 14.69897 No description for 2ajeA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle