Protein: | TRP4_ARATH |
Organism: | Arabidopsis thaliana |
Length: | 640 amino acids |
Reference: | Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16 |
Listed below are up to the top 10 sequence alignment matches, by species, for the PSI-BLAST search against the protein sequence for TRP4_ARATH.
Description | E-value | Query Range |
Subject Range |
|
720.0 | [0..1] | [640..1] |
|
637.0 | [0..1] | [636..1] |
|
629.0 | [0..1] | [636..1] |
|
625.0 | [0..1] | [625..1] |
|
621.0 | [0..1] | [625..1] |
|
593.0 | [0..1] | [627..1] |
Region A: Residues: [1-90] |
1 11 21 31 41 51 | | | | | | 1 MVVKRKLNCG GSNGFDFPNI PKAPRSSRRK VSGKRSDDES EICAIDLLAS LAGKLLEESE 60 61 SSSTSTYASE ADNLDHLGGL IKQELEDGYT |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [91-320] |
1 11 21 31 41 51 | | | | | | 1 TKPCKSEFFD PGNPASKSTS ENTSVTCLPF SSFENDCILE QTPVSDCKRA SGLKSLVGSI 60 61 TEETCVVNED AGSEQGANTF SLKDPSQLHS QSPESVLLDG DVKLAPCTDQ VPNDSFKGYR 120 121 NHSKLVCRDD DENYCKYYKF SDKCKSYRPL SRVGNRRIMQ SVRAISKLKC FEDTRTDGRL 180 181 KALYRKRKLC YGYNPWKRET IHRKRRLSDK GLVVNYDGGL SSESVSNSPE |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [321-422] |
1 11 21 31 41 51 | | | | | | 1 KGESENGDFS AAKIGLLSKD SRVKFSIKSL RIPELVIEVP ETATVGLLKR TVKEAVTALL 60 61 GGGIRIGVLV QGKKVRDDNN TLSQTGLSCR ENLGNLGFTL EP |
Detection Method: | |
Confidence: | 1.12 |
Match: | 1v5oA |
Description: | Solution Structure of the Ubiquitin-like Domain from Mouse Hypothetical 1700011N24Rik Protein |
Matching Structure (courtesy of the PDB): |
Region A: Residues: [423-530] |
1 11 21 31 41 51 | | | | | | 1 GLETLPVPLC SETPVLSLPT DSTKLSERSA ASPALETGIP LPPQDEDYLI NLGNSVENND 60 61 ELVPHLSDIP ADEQPSSDSR ALVPVLALES DALALVPVNE KPKRTELS |
Shown below is our most confident de novo (Rosetta) prediction for this domain.
Click here to view all matches.
Found no confident structure predictions for this domain.
Region A: Residues: [531-640] |
1 11 21 31 41 51 | | | | | | 1 QRRTRRPFSV TEVEALVSAV EEVGTGRWRD VKLRSFENAS HRTYVDLKDK WKTLVHTASI 60 61 SPQQRRGEPV PQELLDRVLG AHRYWTQHQM KQNGKHQVAT TMVVEAGSSM |
Detection Method: | |
Confidence: | 14.69897 |
Match: | 2ajeA |
Description: | No description for 2ajeA was found. |