YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: gi|8809580, gi|1...

General Information:
Name(s) found: gi|8809580 [NCBI NR]
gi|15239546 [NCBI NR]
Description(s) found:
Found 8 descriptions.
SHOW ALL
  • gi|8809580|dbj|BAA97131.1| DNA mismatch repair protein MutS2-like [Arabidopsis thaliana] [NCBI NR]
  • gi|15239546|ref|NP_200220.1| DNA mismatch repair MutS family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 795 amino acids

    Gene Ontology:
    Cellular Component: chloroplast [IEA]
    Biological Process: maintenance of fidelity involved in DNA-dependent DNA replication [IEA]
    mismatch repair [IEA][ISS]
    Molecular Function: ATP binding [IEA][ISS]
    mismatched DNA binding [IEA]
    damaged DNA binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQTLSIAFCN SALVIRRRNS IGNRNRVKLS LISSSSPTLV CHSKSKSQTD SLRVLEWDKL  60
   61 CDVVASFART SLGREATKKK LWSLDQSFSE SLKLLDETDA AIKMLEHGSF CLDLSSIHIS 120
  121 LVESGIRHAK RRLSLRADQA LEVASLLRFF ENLQLDLKAA IKQDGDWYKR FMPLSELIVH 180
  181 PVINRSFVKL VEQVIDPDGT IKDSASSALR QSRERVQTLE RKLQQLLDAI IRSQKDDESV 240
  241 MIKFQLAAEI DGRWCIQMSS NQLTSVNGLL LSSVYFQVLS LEDNMCFSGS GGGTAAEPIA 300
  301 AVSMNDDLQS ARASVAKAEA EILSMLTEKI NARATYSRAY GGAHPDIYLP PEDEVESLSA 360
  361 GENSPDINLP SEKPLSKKEW LLYLPRCYHP LLLYQHKKGI RKTRETVKFH KTADTVLSGA 420
  421 PPIPADFQIS KGTRVLVITG PNTGGKTICL KSVGLAAMMA KSGLYVLATE SARIPWFDNI 480
  481 YADIGDEQSL LQSLSTFSGH LKQISEILSH STSRSLVLLD EVGAGTNPLE GAALGMAILE 540
  541 SFAESGSLLT MATTHHGELK TLKYSNSAFE NACMEFDDLN LKPTYKILWG VPGRSNAINI 600
  601 ADRLGLPCDI IESARELYGS ASAEINEVIL DMERYKQEYQ RLLNESRVYI RLSRELHENL 660
  661 LTAQKNINDH STKERRKMRQ ELTQAGSMTR STLRRTLQQF RSSAGKSSQS KVATQLQTKV 720
  721 KTTKDEDNGI RSSSVVERRP LPEAAAQKVP EVGSSVFVSS LGKKATVLKV EHSKKEILVQ 780
  781 VGIMKMKVKL TDVVA

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..605] PSI-BLAST 137.0 Crystal Structure of E. coli DNA Mismatch Repair enzyme MutS, E38T mutant, in complex with a G.T mismatch
    2 View Details [606..795] PSI-BLAST 82.09691 Crystal Structure Analysis of ClpB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.64

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle