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Protein Overview: VP26A_ARATH

General Information:
Name(s) found: VP26A_ARATH [Swiss-Prot]
Description(s) found:
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  • gi|9759192|dbj|BAB09729.1| vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15238773|ref|NP_200165.1| VPS26A (VACUOLAR PROTEIN SORTING 26A) [Arabidopsis thaliana] [NCBI NR]
  • gi|110735821|dbj|BAE99887.1| vacuolar sorting protein-like [Arabidopsis thaliana] [NCBI NR]
  • Vacuolar protein sorting-associated protein 26A OS=Arabidopsis thaliana GN=VPS26A PE=2 SV=1 [Swiss-Prot]
  • (Q9FJD0) Vacuolar sorting protein-like, embryogenesis protein H beta 58-like protein [athaliana3702.FASTAC.txt]
  • vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein [Arabidopsis thaliana]gi|15238773|ref|NP_200165.1| vacuolar protein sorting-associated protein 26, putative / VPS26, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Vacuolar protein sorting-associated protein 26 [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | vacuolar protein sorting-associated protein 26, putative / VPS26, putative | chr5:21763501-21765382 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • vacuolar sorting protein-like; embryogenesis protein H beta 58-like protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • vacuolar sorting protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: VPS26A | vacuolar protein sorting 26A | chr5:21746275-21748156 REVERSE LENGTH=302 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 302 amino acids

    Gene Ontology:
    Cellular Component: retromer complex [IDA][ISS]
    membrane [IDA]
    microsome [IDA]
    multivesicular body [IDA]
    Biological Process: endosome to lysosome transport [ISS]
    intracellular protein transport [ISS]
    retrograde transport, endosome to Golgi [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNYLLGAFKP ACNISITFTD GKNRKQVPTK KDNGQIVMNP LFQSQETIAG KINIEPYQGK  60
   61 KVEHNGVKVE LLGQIEMYFD RGNFYDFTSL VREIDVPGEI YERKTYPFEF SSVEMPYETY 120
  121 NGVNVRLRYV LKVTVTRGYA GSIVEYQDFV VRNYVPLPPI NNSIKMEVGI EDCLHIEFEY 180
  181 NKSKYHLKDV ILGKIYFLLV RIKIKNMDLE IRRRESTGAG ANTHVETETL AKFELMDGAP 240
  241 VRGESIPVRV FLTPYDLTPT HKNINNKFSV KYYLNLVLVD EEDRRYFKQQ EITLYRLKEE 300
  301 TS

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..302] PSI-BLAST 79.522879 No description for 2fauA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle