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Protein Overview: gi|18399721, gi|...

General Information:
Name(s) found: gi|18399721 [NCBI NR]
gi|11994413 [NCBI NR]
Description(s) found:
Found 11 descriptions.
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  • gi|18399721|ref|NP_566433.1| methyladenine glycosylase family protein [Arabidopsis thaliana] [NCBI NR]
  • gi|11994413|dbj|BAB02415.1| DNA-3-methyladenine glycosidase I-like protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 312 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: DNA repair [IEA][ISS]
    base-excision repair [IEA]
    Molecular Function: DNA-3-methyladenine glycosylase I activity [IEA][ISS]
    catalytic activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKTEAISLT KRGMLPPSSC NSLMDRSESL KRDSVMGNGA AKVRGSLERK KSKSFKEGDS  60
   61 YSSWLITEAP GSIAAVRREQ VAAQQALRKL KIAHYGRSKS TINFTSSKVV PLLNPNPNPH 120
  121 PQRCSFLTPT SDPIYVAYHD EEWGVPVHDD KTLFELLTLS GAQVGSDWTS TLRKRHDYRK 180
  181 AFMEFEAEVV AKLTEKEMNA ISIEYKIEMS KVRGVVENAK KIVEIKKAFV SLEKYLWGFV 240
  241 NHKPISTNYK LGHKIPVKTS KSESISKDMV RRGFRFVGPT VVHSFMQAAG LTNDHLITCC 300
  301 RHAPCTLLAT NP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..120] deduced N/A No confident structure predictions are available.
    2 View Details [121..312] PSI-BLAST 82.69897 No description for 2ofiA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle