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Protein Overview: gi|13877709, gi|...

General Information:
Name(s) found: gi|7671500 [NCBI NR]
gi|41619402 [NCBI NR]
gi|15242272 [NCBI NR]
gi|13877709 [NCBI NR]
gi|114050653 [NCBI NR]
gi|11274013 [NCBI NR]
gi|110736886 [NCBI NR]
Description(s) found:
Found 18 descriptions.
SHOW ALL
  • gi|7671500|emb|CAB89341.1| myb-related protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|41619402|gb|AAS10094.1| MYB transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|15242272|ref|NP_197035.1| ATMYB16 (MYB DOMAIN PROTEIN 16); DNA binding / transcription factor [Arabidopsis thaliana] [NCBI NR]
  • gi|13877709|gb|AAK43932.1|AF370613_1 myb-related protein-like [Arabidopsis thaliana] [NCBI NR]
  • gi|114050653|gb|ABI49476.1| At5g15310 [Arabidopsis thaliana] [NCBI NR]
  • pir||T49966 myb-related protein-like - Arabidopsis thaliana [NCBI NR]
  • gi|110736886|dbj|BAF00400.1| myb-related protein - like [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 326 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to gibberellin stimulus [IEP]
    response to salt stress [IEP]
    cell morphogenesis [IMP]
    regulation of transcription, DNA-dependent [ISS]
    response to jasmonic acid stimulus [IEP]
    response to cadmium ion [IEP]
    response to salicylic acid stimulus [IEP]
    response to ethylene stimulus [IEP]
    response to auxin stimulus [IEP]
    Molecular Function: DNA binding [ISS]
    transcription factor activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGRSPCCDKL GLKKGPWTPE EDQKLLAYIE EHGHGSWRSL PEKAGLHRCG KSCRLRWTNY  60
   61 LRPDIKRGKF NLQEEQTIIQ LHALLGNRWS AIATHLPKRT DNEIKNYWNT HLKKRLVKMG 120
  121 IDPVTHKPKN ETPLSSLGLS KNAAILSHTA QWESARLEAE ARLARESKLL HLQHYQTKTS 180
  181 SQPHHHHGFT HKSLLPNWTT KPHEDQQQLE SPTSTVSFSE MKESIPAKIE FVGSSTGVTL 240
  241 MKEPEHDWIN STMHEFETTQ MGEGIEEGFT GLLLGGDSID RSFSGDKNET AGESSGGDCN 300
  301 YYEDNKNYLD SIFNFVDPSP SDSPMF

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..124] PSI-BLAST 46.69897 c-Myb, DNA-binding domain
    2 View Details [125..326] deduced N/A No confident structure predictions are available.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.334577365229545 bayes_pls_golite062009
  • transcription regulator activity
    		•  0.0696342306231097 bayes_pls_golite062009
    2 No functions predicted.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle