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Protein Overview: gi|7484960, gi|5...

General Information:
Name(s) found: gi|7484960 [NCBI NR]
gi|7267481 [NCBI NR]
gi|5731761 [NCBI NR]
gi|15236486 [NCBI NR]
Description(s) found:
Found 12 descriptions.
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  • pir||T14194 extensin homolog T28D5.90 - Arabidopsis thaliana [NCBI NR]
  • gi|7267481|emb|CAB77965.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|5731761|emb|CAB52562.1| extensin-like protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15236486|ref|NP_192580.1| proline-rich extensin-like family protein [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 513 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: plant-type cell wall organization [IEA]
    Molecular Function: structural constituent of cell wall [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVIRTSRTM GLGQCMVYVV VLSAIAATVT SYPYTSPQTP HYNSPSHEHK IPKYTPHPKP  60
   61 SIYSSSPPPS YYSPSPKVDY KSPPPSYVYS SPPPPYYSPS PKVDYKSLPP PYVYSSPPPP 120
  121 YYSPSPKVNY KSPPPPYVYS SPPPPYYSPS PKGDYKSPPP PYVYSSPPPP YYSPSPKVDY 180
  181 KSPPPPYVYS SPPPPYYSPT PKVDYKSPPP PYVYSSPPPP YYSPSPKVDY KSPPPPYVYS 240
  241 SPPPPYYSPS PKVNYKSPPP PYYRSPPPPY YSPSPKVDYK SPPPPYVYSS PPPPYYSPSP 300
  301 KVDYKSPPPP YVYSSPPPPY YSPTPKVDYK SPPPPYVYSS PPPPYYSPSP KVDYKSPPPP 360
  361 YVYSSPPPPY YSPSPKVDYK SPPPPYVYNS PPPPYYSPSP KVDYKSPPPP YIYNSPPPPY 420
  421 YSPSPKVNYK TPPPPYVYSS PPPPYYSPSP KVNYKSPPPP YVYSSPPPPY YSPSPNVDYK 480
  481 SPPPPYVYSS PPTPYYSPSS KVTYKSPPPP YVY

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..149] deduced N/A No confident structure predictions are available.
    2 View Details [150..347] MSA 2.129992 View MSA. No confident structure predictions are available.
    3 View Details [348..513] MSA 4.123981 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle