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Protein Overview: gi|7021724, gi|1...

General Information:
Name(s) found: gi|7021724 [NCBI NR]
gi|15232574 [NCBI NR]
Description(s) found:
Found 8 descriptions.
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  • gi|7021724|gb|AAF35405.1| hypothetical protein [Arabidopsis thaliana] [NCBI NR]
  • gi|15232574|ref|NP_188158.1| SDE5 (SILENCING DEFECTIVE 5) [Arabidopsis thaliana] [NCBI NR]
    • Organism: Arabidopsis thaliana
    Length: 468 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: NONE FOUND
    Molecular Function: NONE FOUND


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSKIASSSNS DPDSRSLQVL LDTFGSRFSL DDIAAAYCQA SQNVDVAGEI LSAMAEKTPQ  60
   61 CDQVEMKTAT SKPTQVYVPK EVPRQEDSKA KVWRPKRNSI SNGTVSSVIG KEYARTRPIS 120
  121 NAPKEATKPL KINSRDIPET EIWSEEMRKS NEGKISRAPT DVEEFIVKML GEGFQASQEV 180
  181 IHQVLGVCGY DVKKSTEKLL DFSDTKKYAD VGISNEVVSF YYDFQFGSQE GRNAKNGLEK 240
  241 EVLEALFSGA ERYVDKPKVT RHFGERRPGV AGRPVFKPLE DPFQERVVAV KQSSNTSKED 300
  301 DDENEFKAHR KAVREHLNQM KEYYGAAAEA FSKGETERAH RLVEKGHFFG QKAREADDKS 360
  361 VAKMIDVNQE DDSTYEEDEV VTVNMNEHEA KEALRLLKRQ LIYFSGISSF KYLRVQLGEK 420
  421 KEDFKSKRKH IVKLLEGESI PWTEEDGGLV IMIRVDEIDP KKLSFAKK

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..79] deduced N/A Confident ab initio structure predictions are available.
    2 View Details [80..283] MSA 2.063997 View MSA. No confident structure predictions are available.
    3 View Details [284..368] Pfam 18.958607 No description for PF08590.1 was found. No confident structure predictions are available.
    4 View Details [369..468] PSI-BLAST 19.522879 No description for 2d9iA was found.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.99

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle