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Protein Overview: gi|7487007, gi|1...

General Information:
Name(s) found: gi|7487007 [NCBI NR]
gi|7268995 [NCBI NR]
gi|3193284 [NCBI NR]
gi|18411920 [NCBI NR]
Description(s) found:
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  • pir||T01315 hypothetical protein T14P8.16 - Arabidopsis thaliana [NCBI NR]
  • gi|7268995|emb|CAB80728.1| AT4g02350 [Arabidopsis thaliana] [NCBI NR]
  • gi|3193284|gb|AAC19268.1| T14P8.16 [Arabidopsis thaliana] [NCBI NR]
  • gi|18411920|ref|NP_567229.1| exocyst complex subunit Sec15-like family protein [Arabidopsis thaliana] [NCBI NR]
  • (O81298) T14P8.16 protein (AT4G02350 protein) [athaliana3702.FASTAC.txt]
  • AT4g02350 [Arabidopsis thaliana]gi|3193284|gb|AAC19268.1| T14P8.16 gene product [Arabidopsis thaliana]gi|7487007|pir||T01315 hypothetical protein T14P8.16 - Arabidopsis thalianagi|18411920|ref|NP_567229.1| exocyst complex subunit Sec15-like family prot [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Exocyst complex subunit Sec15-like family protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | exocyst complex subunit Sec15-like family protein | chr4:1038157-1040571 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • T14P8.16 [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • AT4g02350 [Arabidopsis thaliana] [nr-271106-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 771 amino acids

    Gene Ontology:
    Cellular Component: membrane [IDA]
    cytosol [IDA]
    plasma membrane [IDA]
    exocyst [IDA]
    Biological Process: pollen tube growth [IMP]
    pollen germination [IMP]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSSKGRRKV GSTTAGAGID SAEKLDELLI SSAICNGEDL GPFVRKTFGT GKPETLLHHL  60
   61 KFFARSKESE IEEVCKAHYQ DFIHAVDDLK SLLSDVESLK SALSDSNSKL QSVAAPLLSS 120
  121 LDSLVEAQTV SKNVDLAIGA VTHCVRVMEL VSRANQHLQS GNFYMALKCV DSIESDFMEK 180
  181 TPSSTLKRML ENRIPAIRSY VERKVNKEFG DWLVEIRVVS RNLGQLAIGE ASAARQREEE 240
  241 LRIKQRQAEE QSRLSLRDCV YALNEEEDDE FGSGHEGSDG GSSGGGLLGF DLTPLYRAYH 300
  301 IHQTLSLGDT FKQYYYNNRD LQLTSDFQIA GFFIVEDRVL RTGGGLISKL EVETLWDTAV 360
  361 TKMCAVLEDQ FSRMQTANHL LLIKDYVSLL GVSLRRDKYH ELLLSDCRKQ ITEALSADKF 420
  421 EQMLMKKEYE YSMNVLSFQL QTSEIVPAFP FIAPFSTTVP DCCRIVRSFI EDSVSFMSHG 480
  481 GQLDFYDVVK KYLDRLLGEV LDEALLKLIS TSVHGVSQAM QVAANMAVFE RACDFFFRHA 540
  541 AHLSGVPLRM AERGRRHFPL TKSQNTAEDT LSGMLKKKID GFMTLLENVN WTSDDIPQGG 600
  601 NEYMNEVLIY LETLVSTAQQ ILPAKVLKRV LRDVLAHISE KIVGTLCGDL VKRLSMAAIK 660
  661 GLDVDIQLLD SFTENLTPLL TDKEAREMKK AFVEIRQMIN LLLSSHPENF VNPVIRERSY 720
  721 NALDYRKVAT VSEKFRDPSD SIFGTFGTRG SRQNPKNKSL DALIKRLKDV S

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    SHOWING SINGLE HITS. [ Hide Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..227] PSI-BLAST 8.154902 Heavy meromyosin subfragment
    2 View Details [228..291] deduced N/A No confident structure predictions are available.
    3 View Details [292..396] MSA 1.070982 View MSA. No confident structure predictions are available.
    4 View Details [397..703] PSI-BLAST 96.221849 Crystal Structure of Sec15 C-terminal domain
    5 View Details [704..771] MSA 2.045994 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.73

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle