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Protein Overview: RH36_ARATH

General Information:
Name(s) found: RH36_ARATH [Swiss-Prot]
Description(s) found:
Found 13 descriptions.
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  • DEAD-box ATP-dependent RNA helicase 36 OS=Arabidopsis thaliana GN=RH36 PE=2 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 491 amino acids

    Gene Ontology:
    Cellular Component: nucleus [IDA]
    Biological Process: post-embryonic development [IMP]
    rRNA processing [IMP]
    embryo sac development [IMP]
    Molecular Function: nucleic acid binding [IEA]
    ATP binding [IEA]
    ATP-dependent helicase activity [IEA][ISS]
    helicase activity [IEA]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MEEPTPEEEG GITIMSKSRK NPKTVVNIQS QKLDSDQNTP QFEKFTNPNP SSDTTSATNF  60
   61 EGLGLAEWAV ETCKELGMRK PTPVQTHCVP KILAGRDVLG LAQTGSGKTA AFALPILHRL 120
  121 AEDPYGVFAL VVTPTRELAF QLAEQFKALG SCLNLRCSVI VGGMDMLTQT MSLVSRPHIV 180
  181 ITTPGRIKVL LENNPDVPPV FSRTKFLVLD EADRVLDVGF QDELRTIFQC LPKSRQTLLF 240
  241 SATMTSNLQA LLEHSSNKAY FYEAYEGLKT VDTLTQQFIF EDKDAKELYL VHILSQMEDK 300
  301 GIRSAMIFVS TCRTCQRLSL MLDELEVENI AMHSLNSQSM RLSALSKFKS GKVPILLATD 360
  361 VASRGLDIPT VDLVINYDIP RDPRDYVHRV GRTARAGRGG LAVSIITETD VKLIHKIEEE 420
  421 VGKKMEPYNK KVITDSLEVT KVSKAKRVAM MKMLDNGFED KVKDRRKLKR KTLADKGLLK 480
  481 KRGKRQKSTE N

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..436] PSI-BLAST 85.69897 No description for 2db3A was found.
    2 View Details [437..491] PSI-BLAST 23.0 Nucleotide excision repair enzyme UvrB


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.98

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle