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Protein Overview: gi|15239314, gi|...

General Information:
Name(s) found: gi|15239314 [NCBI NR]
gi|10177420 [NCBI NR]
Description(s) found:
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  • gi|15239314|ref|NP_201427.1| auxin-responsive protein, putative [Arabidopsis thaliana] [NCBI NR]
  • gi|10177420|dbj|BAB10705.1| auxin-induced protein-like [Arabidopsis thaliana] [NCBI NR]
  • (Q9FH62) Auxin-induced protein-like [athaliana3702.FASTAC.txt]
  • auxin-induced protein-like [Arabidopsis thaliana]gi|15239314|ref|NP_201427.1| auxin-responsive protein, putative [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Auxin-responsive protein [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | auxin-responsive protein, putative | chr5:26488495-26488884 FORWARD [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • auxin-induced protein-like [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • unknown protein [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • | Symbols: | SAUR-like auxin-responsive protein family | chr5:26471269-26471658 FORWARD LENGTH=99 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
  • Auxin-induced protein-like OS=Arabidopsis thaliana GN=At5g66260 PE=4 SV=1 [ARATH-contam.fasta]
    • Organism: Arabidopsis thaliana
    Length: 99 amino acids

    Gene Ontology:
    Cellular Component: NONE FOUND
    Biological Process: response to auxin stimulus [ISS]
    Molecular Function: molecular_function [ND]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVERGSGKG LKQMLKRCSS LGKKSSVDVN FNGVPKGHFV VYVGHSRSRH VIPISFLTHP  60
   61 IFQMLLQQSE EEFGFFQDNG LTIPCDEHFF RALISSINP

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..99] Pfam 37.823909 No description for PF02519.5 was found. Confident ab initio structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.94

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle