YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

Protein Overview: ATL61_ARATH

General Information:
Name(s) found: ATL61_ARATH [Swiss-Prot]
Description(s) found:
SHOW ONLY BEST
  • gi|9279580|dbj|BAB01038.1| unnamed protein product [Arabidopsis thaliana] [NCBI NR]
  • gi|68565311|sp|Q9LUL6.1|ATL3E_ARATH RecName: Full=Putative RING-H2 finger protein ATL3E [NCBI NR]
  • gi|15231830|ref|NP_188049.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] [NCBI NR]
  • Putative RING-H2 finger protein ATL61 OS=Arabidopsis thaliana GN=ATL61 PE=3 SV=1 [Swiss-Prot]
  • Putative RING-H2 finger protein ATL3E OS=Arabidopsis thaliana GN=ATL3E PE=3 SV=1 [Swiss-Prot]
  • (Q9LUL6) Similarity to RING-H2 zinc finger protein ATL3 [athaliana3702.FASTAC.txt]
  • unnamed protein product [Arabidopsis thaliana]gi|15231830|ref|NP_188049.1| zinc finger (C3HC4-type RING finger) family protein [Arabidopsis thaliana] [nrdb_11152004_Chlamydomonas]
  • Tax_Id=3702 Putative RING-H2 finger protein ATL3E [EBI-IPI_Arabidopsis_3.11_12-06-2005_reversed.fasta]
  • | Symbols: | zinc finger (C3HC4-type RING finger) family protein | chr3:4777738-4778352 REVERSE [TAIR_Arabidopsis_na_04-12-2008_con_reversed.fasta]
  • unnamed protein product [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • protein binding / ubiquitin-protein ligase/ zinc ion binding [Arabidopsis thaliana] [nr-271106-contam.fasta]
  • Putative RING-H2 finger protein ATL3E [nr-271106-contam.fasta]
  • | Symbols: | Zinc finger, C3HC4 type (RING finger) family protein | chr3:4777731-4778345 REVERSE LENGTH=204 [TAIR_A_Thaliana_10_12-14-2010_reversed.fasta]
    • Organism: Arabidopsis thaliana
    Length: 204 amino acids

    Gene Ontology:
    Cellular Component: endomembrane system [IEA]
    Biological Process: NONE FOUND
    Molecular Function: zinc ion binding [IEA][ISS]
    protein binding [IEA][ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKESDAVILI HLGINIVFAF FFFGISAVVV SCIIKCYNTH DDDHDHDNNN DGHVSITIKE  60
   61 RVGIKPYVLR SIPIVDFNTK DFKYVLECVV CLSELADGDK ARVLPSCDHW FHVECIDSWL 120
  121 QSNSTCPICR KRVCLKQSRT RPELGGRDKS FNQNHDQTSE HHEFSTDPPT NTDTAIIEDG 180
  181 GCGEANEGQP ELTAVVIDIP AKEI

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

    New Feature: Upload Your Own Microscopy Data

    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..80] deduced N/A No confident structure predictions are available.
    2 View Details [81..204] PSI-BLAST 10.30103 EL5 RING-H2 domain

    Functions predicted (by domain):

    # Gene Ontology predictions
    1 No functions predicted.
    2
    Term Confidence Notes
  • binding
    		•  0.0938889867773109 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle