YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	ATL61_ARATH
Protein type:	Transmembrane
Type Confidence:	0.97
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKESDAVILI HLGINIVFAF FFFGISAVVV SCIIKCYNTH DDDHDHDNNN DGHVSITIKE  60
   61 RVGIKPYVLR SIPIVDFNTK DFKYVLECVV CLSELADGDK ARVLPSCDHW FHVECIDSWL 120
  121 QSNSTCPICR KRVCLKQSRT RPELGGRDKS FNQNHDQTSE HHEFSTDPPT NTDTAIIEDG 180
  181 GCGEANEGQP ELTAVVIDIP AKEI

Type	Start	End	Confidence
Cytoplasmic	1	6	0.66
Transmembrane Helix	7	30	0.85
Non-Cytoplasmic	31	204	0.69