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Protein Overview: CID9_ARATH

General Information:
Name(s) found: CID9_ARATH [Swiss-Prot]
Description(s) found:
Found 11 descriptions.
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  • Polyadenylate-binding protein-interacting protein 9 OS=Arabidopsis thaliana GN=CID9 PE=3 SV=1 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 327 amino acids

    Gene Ontology:
    Cellular Component: cellular_component [ND]
    Biological Process: biological_process [ND]
    Molecular Function: RNA binding [ISS]
    protein binding [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATVTEMPTD VVVVDDVKEV STKSEKIIDE GIEKSSITDS KTETESRLDM HKLVAMFKKL  60
   61 NPLAKEFFPS YYDPKKNNQV AKANQFLPAD DFETTKKQSG EEFDLDAKKD DNTRKRRNYS 120
  121 QGRRRLTGRI SKAQREDSIR RTVYVSDIDQ SVTEEGLAGL FSNCGQVVDC RICGDPHSVL 180
  181 RFAFVEFADD QGAHEALSLG GTMLGFYPVR VLPSKTAILP VNPTFLPRSE DEREMCTRTI 240
  241 YCTNIDKKVS QADVRNFFES ACGEVTRLRL LGDQLHSTRI AFVEFALADS ALSALNCSGM 300
  301 VVGSQPIRVS PSKTPVRPRI TRPPSTN

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


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    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..327] PSI-BLAST 28.522879 No description for 2ghpA was found.

    Functions predicted (by domain):

    # Gene Ontology predictions
    1
    Term Confidence Notes
  • binding
    		•  0.950788308762215 bayes_pls_golite062009
  • nucleic acid binding
    		•  0.29562225149076 bayes_pls_golite062009


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    Protein predicted to be: GLOBULAR (No transmembrane regions or signal peptide)
    Confidence of classification: 0.93

    Source: Reynolds et al. (2008)

    YRC Informatics Platform - Version 3.0
    Created and Maintained by: Michael Riffle