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Protein Overview: YSL6_ARATH

General Information:
Name(s) found: YSL6_ARATH [Swiss-Prot]
Description(s) found:
Found 10 descriptions.
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  • Probable metal-nicotianamine transporter YSL6 OS=Arabidopsis thaliana GN=YSL6 PE=2 SV=2 [Swiss-Prot]
    • Organism: Arabidopsis thaliana
    Length: 676 amino acids

    Gene Ontology:
    Cellular Component: plasma membrane [IDA]
    Biological Process: oligopeptide transport [ISS]
    Molecular Function: oligopeptide transporter activity [ISS]


    Sequence:
    Sequence:
    [PDR BLAST]
    [ProtParam] 
          1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGTEIPRSAE ISEALLPPES EKTVTATEEH VPEWKEQITI RGLTVSALLG TLFCIITHKL  60
   61 NLTVGIIPSL NVAAGLLGFF FVKSWTGFLS KLGFTVKPFT KQENTVIQTC VVACYGLAFS 120
  121 GGFGSYLIAM DEKTYKLIGA DYPGNHAEDV INPGLWWMIG FLFVVSFLGL FSLVPLRKVM 180
  181 VLDYKLTYPS GTATAMLINS FHTNTGAELA GNQVKCLGKY LSLSLIWSCF KWFFSGIGDA 240
  241 CGFDNFPTLG LTLFKNTFYF DFSPTYIGCG LICPHIVNCS VLLGAIISWG ILWPFVSQHA 300
  301 GDWYPADLGS NDFKGLYGYK VFIAIAIILG DGLYNLVKII AVTVKELCSS RSRRLNLPIV 360
  361 TDGVDDSEAS EILLVKKKRD EVFLKDRIPL EFAIAGYVGL AAISTATIPI IFPPLKWYFV 420
  421 LCSYFIAPAL AFCNSYGTGL TDWSLASTYG KIGLFIIASV VGSDGGVIAG LAACGVMMSI 480
  481 VSTAADLMQD FKTGYLTLSS AKSMFVSQLV GTAMGCVIAP LTFWLFWTAF DIGDPNGPYK 540
  541 APYAVIFREM AILGIEGFAE LPKHCLALCY GFFIAALIVN LLRDITPPKI SQFIPIPMAM 600
  601 AVPFYIGAYF AIDMFVGTVI LFVWERINRK DAEDFAGAVA SGLICGDGIW TIPSAILSIL 660
  661 RINPPICMYF GPSSAR

    Protein Complex Data

    No complex found for this protein.

    Mass Spectrometry Data

    No mass spectrometry results found for this protein.

    Yeast Two-Hybrid Data

    The following interactions contain this protein:

    NOT SHOWING SINGLE HITS. [ Show Single Hits ]

    [View our yeast two-hybrid interpretation guidelines.]

    No yeast two-hybrid interactions found for this protein.

    Microscopy / Localization Data

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    No microscopy data found in the PDR for this protein.

    Protein Structure Data


    [What does the above image mean?]
    [View Top Sequence Alignments] [Show Ginzu Version Information]

    Domains predicted:

    #   Region(s) Method Confidence Match Description
    1 View Details [1..137] MSA 2.179994 View MSA. No confident structure predictions are available.
    2 View Details [138..363] MSA 1.19596 View MSA. No confident structure predictions are available.
    3 View Details [364..451] deduced N/A No confident structure predictions are available.
    4 View Details [452..529] MSA 1.202994 View MSA. No confident structure predictions are available.
    5 View Details [530..676] MSA 4.202995 View MSA. No confident structure predictions are available.


    Reference: Drew K, et al. (2011) The proteome folding project: Proteome-scale prediction of structure and function. Genome Res. 2011 Sep 16


    Philius Transmembrane Prediction:

    [View Details]
    Source: Reynolds et al. 2008. Manuscript submitted Philius confidence legend
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